Other packages > Find by keyword >

colocPropTest  

Proportional Testing for Colocalisation Analysis
View on CRAN: Click here


Download and install colocPropTest package within the R console
Install from CRAN:
install.packages("colocPropTest")

Install from Github:
library("remotes")
install_github("cran/colocPropTest")

Install by package version:
library("remotes")
install_version("colocPropTest", "0.9.3")



Attach the package and use:
library("colocPropTest")
Maintained by
Chris Wallace
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-06-11
Latest Update: 2024-06-11
Description:
Colocalisation analysis tests whether two traits share a causal genetic variant in a specified genomic region. Proportional testing for colocalisation has been previously proposed [Wallace (2013) <doi:10.1002/gepi.21765>], but is reimplemented here to overcome barriers to its adoption. Its use is complementary to the fine- mapping based colocalisation method in the 'coloc' package, and may be used in particular to identify false "H3" conclusions in 'coloc'.
How to cite:
Chris Wallace (2024). colocPropTest: Proportional Testing for Colocalisation Analysis. R package version 0.9.3, https://cran.r-project.org/web/packages/colocPropTest. Accessed 11 Mar. 2026.
Previous versions and publish date:
0.9.1 (2024-06-11 13:30), 0.9.2 (2025-09-08 23:20)
Other packages that cited colocPropTest R package
View colocPropTest citation profile
Other R packages that colocPropTest depends, imports, suggests or enhances
Complete documentation for colocPropTest
Functions, R codes and Examples using the colocPropTest R package
Full colocPropTest package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

igoR  
Intergovernmental Organizations Database
Tools to extract information from the Intergovernmental Organizations ('IGO') Database , version 3, ...
Download / Learn more Package Citations See dependency  
openNLPdata  
Apache OpenNLP Jars and Basic English Language Models
Apache OpenNLP jars and basic English language models. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
sorocs  
A Bayesian Semiparametric Approach to Correlated ROC Surfaces
A Bayesian semiparametric Dirichlet process mixtures to estimate correlated receiver operating chara ...
Download / Learn more Package Citations See dependency  
histogram  
Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins
Automatic construction of regular and irregular histograms as described in Rozenholc/Mildenberger/Ga ...
Download / Learn more Package Citations See dependency  
roptions  
Option Strategies and Valuation
Collection of tools to develop options strategies, value option contracts using the Black-Scholes-Me ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

225,784

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA