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babsim.hospital
View on CRAN: Click
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Download and install babsim.hospital package within the R console
Install from CRAN:
install.packages("babsim.hospital")
Install from Github:
library("remotes")
install_github("cran/babsim.hospital")
Install by package version:
library("remotes")
install_version("babsim.hospital", "11.8.8")
Attach the package and use:
library("babsim.hospital")
Maintained by
Thomas Bartz-Beielstein
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-12-14
Latest Update: 2022-05-30
Description:
Implements a discrete-event simulation model for a hospital resource planning problem.
The project is motivated by the challenges faced by health care institutions in the current COVID-19 pandemic.
It can be used by health departments to forecast demand for intensive care beds, ventilators, and staff resources.
Our modelling approach is inspired by "A novel modelling technique to predict resource requirements in critical care - a case study" (Lawton and McCooe 2019) and combines two powerful technologies:
(i) discrete event simulation using the 'simmer' package and
(ii) model-based optimization using 'SPOT'.
Ucar I, Smeets B, Azcorra A (2019) .
Bartz-Beielstein T, Lasarczyk C W G, Preuss M (2005) .
Lawton T, McCooe M (2019) .
How to cite:
Thomas Bartz-Beielstein (2020). babsim.hospital: Bartz & Bartz Simulation Hospital. R package version 11.8.8, https://cran.r-project.org/web/packages/babsim.hospital
Previous versions and publish date:
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Other R packages that babsim.hospital depends,
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Functions, R codes and Examples using
the babsim.hospital R package
Some associated functions: GABeds220200624 . GermanCounties . GermanStates . RiskScore . aggMax . aggregateSimulationReplications . autoplot.BabsimDailyCases . babsimHospital . babsimHospitalPara . babsimToolsConf . checkSimPara . checkTestConfig . checkTestData . checkTrainConfig . dataCovidBeds20200624 . dataICUBeds20200821 . ensureRangeOpen . envToTibble . ex1InfectedDf . extendRki . extractSimulationResults . fetchRkiCases . fitExponential . funBaBSimHospital . funOptimizeSim . funWrapOptimizeSim . getAndCheckTrainData . getArrivalTimes . getBestParameter . getBounds . getConfFromData . getDailyMaxResults . getDecision . getDiviLinks . getError . getIcuBeds . getInfectedPerDay . getMatrixD . getMatrixP . getObkData . getParaSet . getParameterDataFrame . getParameterName . getParameterNameList . getPeakVec . getRealBeds . getRegionIcu . getRegionRki . getRkiData . getRkiRisk . getStartParameter . getSyntheticData . getTestData . getTrainTestObjFun . ggVisualizeIcu . ggVisualizeRki . ggVisualizeRkiAge . ggVisualizeRkiEvents . ggVisualizeRkiExtended . ggVisualizeRkiExtendedDataCalculation . icudata . koelnarchive . mapAgeGroupToAge . mapAgeToAgeGroup . mapPToPara . mapXToPara . messageDateRange . messagef . modelResultHospital . nrwarchive . obkarchive . paras . plotDailyMaxResults . plotPostprocessedEnvs . postprocessEnvs . printConf . rkiGeschlechtToSex . rkiToBabsimArrivals . rkiToBabsimData . rkidata . rtgamma . runOptLocal . runoptDirect . runoptUK . skip_if_quicktest . smoothParameter . softmax . switchRkiRefdatumToMeldedatum . synthpara . ukpara . ukpara01 . ukpara02 . updateIcudataFile . updateMatrixP . updateParaSet . updateRkidataFile . vaccineCounts . visualizeGraph . visualizeIcu . visualizeRki . visualizeRkiEvents . visualizeUK . weighted_rmse .
Some associated R codes: GABeds20200624.R . PackageData.R . aggregateSimulationReplications.R . babsimHospital.R . babsimHospitalPara.R . babsimToolsConf.R . checkSimPara.R . class-BabsimCaselog.R . class-BabsimCases.R . class-BabsimDailyCases.R . class-BabsimRkiCases.R . ensureRangeOpen.R . envToTibble.R . extendRki.R . extractSimulationResults.R . fitExponential.R . funBabsimHospital.R . funOptimizeSim.R . funWrapOptimizeSim.R . getArrivalTimes.R . getBestParameter.R . getBounds.R . getConfFromData.R . getDailyMaxResults.R . getDecision.R . getDiviLinks.R . getError.R . getIcuBeds.R . getInfectedPerDay.R . getMatrixD.R . getMatrixP.R . getObkData.R . getParaSet.R . getParameterDataFrame.R . getParameterNameList.R . getParamterName.R . getPeakVec.R . getRealBeds.R . getRegionIcu.R . getRegionRki.R . getRkiData.R . getRkiRisk.R . getStartParameter.R . getSyntheticData.R . getTrainTestObjFun.R . ggVisualizeIcu.R . ggVisualizeRki.R . ggVisualizeRkiAge.R . ggVisualizeRkiEvents.R . ggVisualizeRkiExtended.R . ggVisualizeRkiExtendedDataCalculation.R . icudata.R . mapAgeToAgeGroup.R . mapAgegroupToAge.R . mapPToPara.R . mapXToPara.R . messageDateRange.R . messagef.R . modelResultHospital.R . plotDailyMaxResults.R . plotPostprocessedEnvs.R . postprocessEnvs.R . printConf.R . rkiToBabsimArrivals.R . rkiToBabsimData.R . rkidata.R . rtgamma.R . runOptLocal.R . runoptDirect.R . runoptUK.R . skip_if_quicktest.R . smoothParameter.R . softmax.R . switchRkiRefdatumToMeldedatum.R . ukpara.R . ukpara01.R . ukpara02.R . updateIcudataFile.R . updateMatrixP.R . updateParaSet.R . updateRkidataFile.R . visualizeGraph.R . visualizeIcu.R . visualizeRki.R . visualizeRkiEvents.R . visualizeUK.R . weighted_rmse.R . Full babsim.hospital package functions and examples
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