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Rlabkey

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Data Exchange Between R and 'LabKey' Server

View on CRAN: Click here

Download and install Rlabkey package within the R console
Install from CRAN:

 install.packages("Rlabkey")

Install from Github:

 library("remotes")

                        install_github("cran/Rlabkey")

Install by package version:

 library("remotes")

                        install_version("Rlabkey", "3.4.0")

Attach the package and use:

 library("Rlabkey")

Maintained by
Cory Nathe
[Scholar Profile | Author Map]

All associated links for this package

First Published: 2008-10-28

Latest Update: 2023-08-18

Description:

The 'LabKey' client library for R makes it easy for R users to load live data from a 'LabKey' Server, , into the R environment for analysis, provided users have permissions to read the data. It also enables R users to insert, update, and delete records stored on a 'LabKey' Server, provided they have appropriate permissions to do so.

How to cite:

Cory Nathe (2008). Rlabkey: Data Exchange Between R and 'LabKey' Server. R package version 3.4.0, https://cran.r-project.org/web/packages/Rlabkey. Accessed 06 Nov. 2024.

Previous versions and publish date:

0.0.4 (2008-10-28 13:58), 0.0.5 (2009-01-12 20:43), 0.0.6 (2009-03-24 22:21), 0.0.7 (2009-04-01 08:39), 0.0.8 (2009-07-03 09:15), 0.0.9 (2009-12-02 08:57), 2.1.112 (2010-04-04 18:01), 2.1.114 (2010-08-24 12:47), 2.1.115 (2010-11-17 09:17), 2.1.116 (2012-01-02 19:43), 2.1.117 (2012-03-27 21:57), 2.1.118 (2012-05-05 08:18), 2.1.119 (2012-09-01 07:49), 2.1.120 (2013-01-04 09:07), 2.1.121 (2013-02-14 16:11), 2.1.122 (2013-05-20 14:18), 2.1.123 (2013-11-04 22:10), 2.1.125 (2014-08-28 17:26), 2.1.126 (2014-12-17 23:17), 2.1.127 (2015-02-17 23:35), 2.1.128 (2015-09-23 03:01), 2.1.129 (2015-12-16 01:03), 2.1.130 (2016-05-25 15:52), 2.1.131 (2016-09-26 16:46), 2.1.132 (2016-11-30 16:28), 2.1.133 (2017-01-21 01:43), 2.1.134 (2017-03-21 07:50), 2.1.135 (2017-06-19 15:57), 2.1.136 (2017-10-16 15:16), 2.2.0 (2018-02-08 22:55), 2.2.1 (2018-03-13 14:46), 2.2.2 (2018-07-12 22:20), 2.2.3 (2018-10-11 20:30), 2.2.4 (2018-11-05 20:20), 2.2.5 (2019-03-14 14:33), 2.3.0 (2019-05-26 00:50), 2.3.1 (2019-07-25 16:10), 2.3.2 (2019-09-17 16:20), 2.3.3 (2019-11-04 15:30), 2.3.4 (2020-02-11 15:40), 2.4.0 (2020-04-09 06:50), 2.5.0 (2020-07-01 09:50), 2.5.1 (2020-07-13 18:10), 2.5.2 (2020-08-12 17:00), 2.5.3 (2020-08-26 18:11), 2.5.4 (2020-11-06 19:50), 2.5.5 (2020-12-17 21:00), 2.6.0 (2021-02-08 17:30), 2.7.0 (2021-05-20 15:20), 2.8.0 (2021-07-08 23:30), 2.8.1 (2021-09-14 15:40), 2.8.2 (2021-12-06 22:30), 2.8.3 (2022-02-25 16:00), 2.8.4 (2022-04-01 16:20), 2.9.0 (2022-09-21 22:20), 2.9.1 (2023-01-07 04:10), 2.10.0 (2023-04-04 16:10), 2.11.0 (2023-05-02 22:40), 2.12.0 (2023-08-18 23:22), 3.0.0 (2023-11-07 18:20), 3.1.0 (2023-12-06 16:20), 3.2.0 (2024-01-09 07:50), 3.2.1 (2024-04-05 21:33), 3.2.2 (2024-06-07 15:10), 3.2.3 (2024-06-28 16:10), 3.3.0 (2024-08-19 19:50)

Other packages that cited Rlabkey R package

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Other R packages that Rlabkey depends, imports, suggests or enhances

View Rlabkey dependency map

Complete documentation for Rlabkey

View documentation PDF

Functions, R codes and Examples using the Rlabkey R package

Some associated functions: Rlabkey-package . getFolderPath . getLookups . getRows . getSchema . getSession . labkey.acceptSelfSignedCerts . labkey.curlOptions . labkey.deleteRows . labkey.domain.FILTER_TYPES . labkey.domain.create . labkey.domain.createAndLoad . labkey.domain.createConditionalFormat . labkey.domain.createConditionalFormatQueryFilter . labkey.domain.createDesign . labkey.domain.createIndices . labkey.domain.drop . labkey.domain.get . labkey.domain.inferFields . labkey.domain.save . labkey.executeSql . labkey.experiment.SAMPLE_DERIVATION_PROTOCOL . labkey.experiment.createData . labkey.experiment.createMaterial . labkey.experiment.createRun . labkey.experiment.saveBatch . labkey.experiment.saveRuns . labkey.getBaseUrl . labkey.getDefaultViewDetails . labkey.getFolders . labkey.getLookupDetails . labkey.getModuleProperty . labkey.getQueries . labkey.getQueryDetails . labkey.getQueryViews . labkey.getRequestOptions . labkey.getSchemas . labkey.importRows . labkey.insertRows . labkey.makeRemotePath . labkey.pipeline.getFileStatus . labkey.pipeline.getPipelineContainer . labkey.pipeline.getProtocols . labkey.pipeline.startAnalysis . labkey.provenance.addRecordingStep . labkey.provenance.createProvenanceParams . labkey.provenance.startRecording . labkey.provenance.stopRecording . labkey.query.import . labkey.rstudio.initRStudio . labkey.rstudio.initReport . labkey.rstudio.initSession . labkey.rstudio.isInitialized . labkey.rstudio.saveReport . labkey.saveBatch . labkey.security.createContainer . labkey.security.deleteContainer . labkey.security.getContainers . labkey.security.impersonateUser . labkey.security.moveContainer . labkey.security.stopImpersonating . labkey.selectRows . labkey.setCurlOptions . labkey.setDebugMode . labkey.setDefaults . labkey.setModuleProperty . labkey.storage.create . labkey.storage.delete . labkey.storage.update . labkey.transform.getRunPropertyValue . labkey.transform.readRunPropertiesFile . labkey.truncateTable . labkey.updateRows . labkey.webdav.delete . labkey.webdav.downloadFolder . labkey.webdav.get . labkey.webdav.listDir . labkey.webdav.mkDir . labkey.webdav.mkDirs . labkey.webdav.pathExists . labkey.webdav.put . labkey.whoAmI . lsFolders . lsProjects . lsSchemas . makeFilter . saveResults .
Some associated R codes: RcppExports.R . fromJSON2.R . ifcookie.R . labkey.curlOptions.R . labkey.defaults.R . labkey.deleteRows.R . labkey.domain.R . labkey.executeSql.R . labkey.experiment.R . labkey.getFolders.R . labkey.getQueryInfo.R . labkey.getQueryLists.R . labkey.getSchemas.R . labkey.importRows.R . labkey.insertRows.R . labkey.makeRemotePath.R . labkey.moduleProperty.R . labkey.pipeline.R . labkey.provenance.R . labkey.query.import.R . labkey.rstudio.R . labkey.saveBatch.R . labkey.security.R . labkey.selectRows.R . labkey.setCurlOptions.R . labkey.storage.R . labkey.transform.R . labkey.updateRows.R . labkey.webdav.R . makeDF.R . makeFilter.R . parseHeader.R . schemaObjects.R . Full Rlabkey package functions and examples

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