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analogue  

Analogue and Weighted Averaging Methods for Palaeoecology
View on CRAN: Click here


Download and install analogue package within the R console
Install from CRAN:
install.packages("analogue")

Install from Github:
library("remotes")
install_github("cran/analogue")

Install by package version:
library("remotes")
install_version("analogue", "0.17-7")



Attach the package and use:
library("analogue")
Maintained by
Gavin L. Simpson
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2006-12-07
Latest Update: 2021-06-20
Description:
Fits Modern Analogue Technique and Weighted Averaging transfer function models for prediction of environmental data from species data, and related methods used in palaeoecology.
How to cite:
Gavin L. Simpson (2006). analogue: Analogue and Weighted Averaging Methods for Palaeoecology. R package version 0.17-7, https://cran.r-project.org/web/packages/analogue. Accessed 22 Dec. 2024.
Previous versions and publish date:
0.3-0 (2006-12-07 18:52), 0.3-1 (2007-01-05 14:21), 0.3-3 (2007-03-23 11:51), 0.4-0 (2007-07-07 20:46), 0.4-1 (2007-07-09 21:06), 0.4-2 (2007-08-09 09:57), 0.4-3 (2007-10-14 11:47), 0.5-0 (2008-04-10 15:34), 0.5-1 (2008-04-24 08:39), 0.5-2 (2008-05-13 20:20), 0.6-6 (2009-03-10 20:23), 0.6-8 (2009-05-07 07:24), 0.6-21 (2009-11-03 12:25), 0.6-22 (2009-11-05 13:34), 0.6-23 (2010-03-13 15:54), 0.7-0 (2011-05-26 22:48), 0.8-0 (2012-01-12 10:30), 0.8-2 (2012-04-05 07:37), 0.10-0 (2013-01-03 20:14), 0.12-0 (2013-12-14 07:24), 0.14-0 (2014-08-29 07:28), 0.16-0 (2014-11-19 02:09), 0.16-3 (2015-05-29 07:34), 0.17-0 (2016-02-28 09:59), 0.17-1 (2018-10-23 06:40), 0.17-3 (2019-05-12 00:40), 0.17-4 (2020-02-06 07:20), 0.17-5 (2020-07-28 08:50), 0.17-6 (2021-06-20 20:10)
Other packages that cited analogue R package
View analogue citation profile
Other R packages that analogue depends, imports, suggests or enhances
Complete documentation for analogue
Functions, R codes and Examples using the analogue R package
Some associated functions: ImbrieKipp . Pollen . RMSEP . Stratiplot . abernethy . analog . analogue-internal . analogue-package . bayesF . bootstrap . bootstrap.wa . bootstrapObject . caterpillarPlot . chooseTaxa . cma . compare . crossval . densityplot.residLen . deshrink . dissimilarities . distance . evenlySampled . fitted.logitreg . fuse . getK . gradientDist . hist.residLen . histogram.residLen . join . logitreg . mat . mcarlo . minDC . n2 . optima . panel.Loess . panel.Stratiplot . pcr . performance . plot.dissimilarities . plot.evenSample . plot.logitreg . plot.mat . plot.mcarlo . plot.minDC . plot.prcurve . plot.residLen . plot.roc . plot.sppResponse . plot.wa . prcurve . predict.logitreg . predict.mat . predict.pcr . predict.prcurve . predict.wa . rankDC . reconPlot . residLen . residuals.prcurve . rlgh . roc . scores.prcurve . screeplot . smoothFuns . splitSample . sppResponse.prcurve . stdError . summary.analog . summary.bootstrap.mat . summary.cma . summary.mat . summary.predict.mat . swapdiat . swappH . timetrack . tortula . tran . varExpl . wa . weightedCor . 
Some associated R codes: RMSEP.R . RMSEP.bootstrap.wa.R . Stratiplot.R . Stratiplot.formula.R . Stratiplot.matrix.R . analog.R . as.data.frame.optima.R . bayesF.R . bootstrap.R . bootstrap.wa.R . caterpillarPlot.R . ccaFit.R . chooseTaxa.R . cma.R . coef.pcr.R . coef.wa.R . compare.R . crossval.R . crossval.pcr.R . crossval.wa.R . densityplot.residLen.R . deshrink.R . deshrinkPred.R . dissimilarities.R . distance.R . dotplot.rankDC.R . eigenvals.pcr.R . evenSample.R . fitPCR.R . fitted.logitreg.R . fitted.mat.R . fitted.pcr.R . fitted.prcurve.R . fitted.timetrack.R . fitted.wa.R . fixUpTol.R . fuse.R . fuse.dist.R . fuse.matrix.R . getK.R . gradientDist.R . head.join.R . hist.residLen.R . histogram.residLen.R . initCurve.R . internal.R . join.R . lines.prcurve.R . logitreg.R . logitreg.analog.R . mat.R . mcarlo.R . minDC.R . minDC.wa.R . n2.R . new-distance.R . optima.R . panel.Loess.R . panel.Stratiplot.R . pcr.R . performance.R . performance.bootstrap.wa.R . performance.crossval.R . performance.pcr.R . performance.predict.wa.R . performance.wa.R . plot.bayesF.R . plot.cma.R . plot.dissimilarities.R . plot.evenSample.R . plot.gradientDist.R . plot.logitreg.R . plot.mat.R . plot.mcarlo.R . plot.prcurve.R . plot.rankDC.R . plot.residLen.R . plot.roc.R . plot.sppResponse.R . plot.timetrack.R . plot.wa.R . points.timetrack.R . prcurve.R . predict.logitreg.R . predict.mat.R . predict.pcr.R . predict.prcurve.R . predict.timetrack.R . predict.wa.R . print.bootstrap.wa.R . print.performance.R . print.predict.wa.R . print.residLen.R . print.roc.R . print.summary.roc.R . print.wa.R . rankDC.R . rdaFit.R . reconPlot.R . reconPlot.predict.wa.R . residLen.R . residuals.bootstrap.mat.R . residuals.mat.R . residuals.pcr.R . residuals.prcurve.R . residuals.wa.R . roc.R . scores.prcurve.R . scores.timetrack.R . screeplot.R . screeplot.pcr.R . smoothGAM.R . smoothSpline.R . splitSample.R . sppResponse.R . sppResponse.prcurve.R . stdError.R . summary.analog.R . summary.bootstrap.mat.R . summary.cma.R . summary.logitreg.R . summary.mat.R . summary.predict.mat.R . summary.roc.R . tail.join.R . timetrack.R . tolerance.R . tran.R . varExpl.R . wa.R . wa.formula.R . waFit.R . weightedCor.R . zzz.R .  Full analogue package functions and examples
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