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actel  

Acoustic Telemetry Data Analysis
View on CRAN: Click here


Download and install actel package within the R console
Install from CRAN:
install.packages("actel")

Install from Github:
library("remotes")
install_github("cran/actel")

Install by package version:
library("remotes")
install_version("actel", "1.3.0")



Attach the package and use:
library("actel")
Maintained by
Hugo Flávio
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-06-13
Latest Update: 2021-01-05
Description:
Designed for studies where animals tagged with acoustic tags are expected to move through receiver arrays. This package combines the advantages of automatic sorting and checking of animal movements with the possibility for user intervention on tags that deviate from expected behaviour. The three analysis functions (explore(), migration() and residency()) allow the users to analyse their data in a systematic way, making it easy to compare results from different studies. CJS calculations are based on Perry et al. (2012) .
How to cite:
Hugo Flávio (2020). actel: Acoustic Telemetry Data Analysis. R package version 1.3.0, https://cran.r-project.org/web/packages/actel. Accessed 06 Nov. 2024.
Previous versions and publish date:
1.0.0 (2020-06-13 15:00), 1.1.0 (2020-08-01 13:10), 1.1.1 (2020-09-11 21:00), 1.2.0 (2020-11-01 16:50), 1.2.1 (2021-01-05 22:40)
Other packages that cited actel R package
View actel citation profile
Other R packages that actel depends, imports, suggests or enhances
Complete documentation for actel
Functions, R codes and Examples using the actel R package
Some associated functions: actel-deprecated . actel . additional.residency.results . advEfficiency . appendTo . assembleArrayCJS . assembleGroupCJS . assembleMatrices . assembleOutput . assembleResidency . assembleSectionOverview . assembleSplitCJS . assembleTimetable . assembleValidMoves . assembleValidSecMoves . blameArrays . blankWorkspace . breakMatricesByArray . checkArguments . checkDeploymentStations . checkDeploymentTimes . checkDetectionsBeforeRelease . checkDupDetections . checkDupSignals . checkFirstDetBackFromRelease . checkGUI . checkImpassables . checkInactiveness . checkIssue79 . checkJumpDistance . checkLinearity . checkMinimumN . checkNoDetections . checkReport . checkSMovesN . checkSpeeds . checkTagsInUnknownReceivers . checkToken . checkUnknownReceivers . checkUpstream . check_args . circularSection . cjs_args . collectStrays . combine . combineCJS . compileDetections . completeMatrix . convertCodes . convertTimes . copyOfCirclePlotRad . copyOfRosediagRad . countArrayFailures . countBackMoves . createEventRanges . createNewEvents . createStandards . createUniqueSerials . createWorkspace . darken . dataToList . decimalTime . deleteHelpers . detectionsSingleWidget . detectionsTabbedWidget . discardFirst . distancesMatrix . dotList . dotMatrix . dotPaths . dualArrayCJS . dualMatrix . efficiencyMatrix . emergencyBreak . emptyMatrix . eventsSingleWidget . eventsTabbedWidget . example.biometrics . example.deployments . example.detections . example.distances . example.results . example.spatial . exampleWorkspace . excludeTags . expandEvent . explore . extractCodeSpaces . extractSignals . fact . findDirectChains . findPeers . findSecondsPerSection . findShortestChains . firstArrayFailure . getDualMatrices . getResidency . getSpeeds . getTimes . gg_colour_hue . globalRatios . graphicalInvalidate . graphicalInvalidateDetections . groupMovements . includeIntraArrayEstimates . includeMissing . includeUnknownReceiver . invalidateDetections . invalidateEvents . liveArrayTimes . loadBio . loadDeployments . loadDetections . loadDistances . loadDot . loadShape . loadSpatial . loadStudyData . lowestSignal . match.POSIXt . matchl . mbGroupCJS . mbSplitCJS . migration . minuteTime . move_args . movementSpeeds . movementTimes . myRoseDiag . na.as.false . nearsq . oneWayMoves . overrideValidityChecks . plotArray . plotDetections . plotLive . plotMoves . plotRatios . plotResidency . plotSensors . plotTimes . preload . preloadDetections . printArrayOverview . printBiometrics . printCircular . printDot . printDotplots . printEfficiency . printExploreRmd . printGlobalRatios . printIndividualResidency . printIndividuals . printLastArray . printLastSection . printMigrationRmd . printProgression . printResidencyRmd . printSectionTimes . printSensorData . printSurvivalGraphic . processStandardFile . processThelmaNewFile . processThelmaOldFile . processVemcoFile . readDot . recoverLog . resPositions . resRatios . resRatiosIndOut . res_assembleOutput . res_efficiency . residency . ringsRel . roseMean . roundDown . roundUp . sectionMovements . setSpatialStandards . shapeToRaster . simpleCJS . simplifyMovements . speedReleaseToFirst . splitDetections . splitN . splitSignals . stationName . std.error.circular . stopAndReport . storeStrays . substrRight . tableInteraction . timesToCircular . transferValidity . transformSpatial . transitionLayer . updateValidity . userInput . user_interaction_args . validateDetections . vectorsIntoTables . widget_args . 
Some associated R codes: CJS.R . actel-deprecated.R . actel.R . check.R . distances.R . explore.R . get.R . helper.R . load.R . migration.R . movements.R . plot.R . preload.R . print.R . residency.R . user_interaction.R . widget_setups.R . z_examples.R . zzz.R .  Full actel package functions and examples
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