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SPIAssay  

A Genetic-Based Assay for the Identification of Cell Lines
View on CRAN: Click here


Download and install SPIAssay package within the R console
Install from CRAN:
install.packages("SPIAssay")

Install from Github:
library("remotes")
install_github("cran/SPIAssay")

Install by package version:
library("remotes")
install_version("SPIAssay", "1.1.0")



Attach the package and use:
library("SPIAssay")
Maintained by
Davide Prandi
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2011-08-04
Latest Update: 2023-08-18
Description:
The SNP Panel Identification Assay (SPIA) is a package that enables an accurate determination of cell line identity from the genotype of single nucleotide polymorphisms (SNPs). The SPIA test allows to discern when two cell lines are close enough to be called similar and when they are not. Details about the method are available at "Demichelis et al. (2008) SNP panel identification assay (SPIA): a genetic-based assay for the identification of cell lines. Nucleic Acids Res., 3, 2446-2456".
How to cite:
Davide Prandi (2011). SPIAssay: A Genetic-Based Assay for the Identification of Cell Lines. R package version 1.1.0, https://cran.r-project.org/web/packages/SPIAssay. Accessed 07 Nov. 2024.
Previous versions and publish date:
1.0.0 (2011-08-04 13:28), 1.1.0 (2016-08-19 14:21)
Other packages that cited SPIAssay R package
View SPIAssay citation profile
Other R packages that SPIAssay depends, imports, suggests or enhances
Functions, R codes and Examples using the SPIAssay R package
Some associated functions: ComputingSPIADistance . SPIAPlot . SPIATest . SPIAssay . getSPIALimits . toSPIAData . 
Some associated R codes: ComputingSPIADistance.R . SPIAPlot.R . SPIATest.R . getSPIALimits.R . toSPIAData.R .  Full SPIAssay package functions and examples
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