Other packages > Find by keyword >

RapidoPGS  

A Fast and Light Package to Compute Polygenic Risk Scores
View on CRAN: Click here


Download and install RapidoPGS package within the R console
Install from CRAN:
install.packages("RapidoPGS")

Install from Github:
library("remotes")
install_github("cran/RapidoPGS")

Install by package version:
library("remotes")
install_version("RapidoPGS", "2.3.0")



Attach the package and use:
library("RapidoPGS")
Maintained by
Guillermo Reales
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-08-07
Latest Update: 2023-10-13
Description:
Quickly computes polygenic scores from GWAS summary statistics of either case-control or quantitative traits without parameter tuning. Reales,G., Vigorito, E., Kelemen,M., Wallace,C. (2021) <doi:10.1101/2020.07.24.220392> "RápidoPGS: A rapid polygenic score calculator for summary GWAS data without a test dataset".
How to cite:
Guillermo Reales (2020). RapidoPGS: A Fast and Light Package to Compute Polygenic Risk Scores. R package version 2.3.0, https://cran.r-project.org/web/packages/RapidoPGS
Previous versions and publish date:
1.0.2 (2020-08-07 16:20), 2.1.0 (2021-06-17 12:10), 2.2.0 (2022-06-15 15:40)
Other packages that cited RapidoPGS R package
View RapidoPGS citation profile
Other R packages that RapidoPGS depends, imports, suggests or enhances
Functions, R codes and Examples using the RapidoPGS R package
Some associated functions: EUR_ld.blocks . EUR_ld.blocks38 . create_1000G . gwascat.download . logsum . michailidou . michailidou19 . rapidopgs_multi . rapidopgs_single . sd.prior.est . sdY.est . wakefield_pp . wakefield_pp_quant . 
Some associated R codes: data.R . globals.R . rapfunc.R .  Full RapidoPGS package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

buildr  
Organize & Run Build Scripts Comfortably
Working with reproducible reports or any other similar projects often require to run the script that ...
Download / Learn more Package Citations See dependency  
lgarch  
Simulation and Estimation of Log-GARCH Models
Simulation and estimation of univariate and multivariate log-GARCH models. The main functions of the ...
Download / Learn more Package Citations See dependency  
Deriv  
Symbolic Differentiation
R-based solution for symbolic differentiation. It admits user-defined function as well as function s ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
bulletr  
Algorithms for Matching Bullet Lands
Analyze bullet lands using nonparametric methods. We provide a reading routine for x3p files (see &l ...
Download / Learn more Package Citations See dependency  

22,086

R Packages

187,731

Dependencies

55,244

Author Associations

22,087

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns