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RapidoPGS  

A Fast and Light Package to Compute Polygenic Risk Scores
View on CRAN: Click here


Download and install RapidoPGS package within the R console
Install from CRAN:
install.packages("RapidoPGS")

Install from Github:
library("remotes")
install_github("cran/RapidoPGS")

Install by package version:
library("remotes")
install_version("RapidoPGS", "2.3.1")



Attach the package and use:
library("RapidoPGS")
Maintained by
Guillermo Reales
[Scholar Profile | Author Map]
First Published: 2020-08-07
Latest Update: 2023-10-13
Description:
Quickly computes polygenic scores from GWAS summary statistics of either case-control or quantitative traits without parameter tuning. Reales,G., Vigorito, E., Kelemen,M., Wallace,C. (2021) "R
How to cite:
Guillermo Reales (2020). RapidoPGS: A Fast and Light Package to Compute Polygenic Risk Scores. R package version 2.3.1, https://cran.r-project.org/web/packages/RapidoPGS. Accessed 17 Apr. 2025.
Previous versions and publish date:
1.0.2 (2020-08-07 16:20), 2.1.0 (2021-06-17 12:10), 2.2.0 (2022-06-15 15:40), 2.3.0 (2023-10-13 14:30)
Other packages that cited RapidoPGS R package
View RapidoPGS citation profile
Other R packages that RapidoPGS depends, imports, suggests or enhances
Complete documentation for RapidoPGS
Functions, R codes and Examples using the RapidoPGS R package
Some associated functions: EUR_ld.blocks . EUR_ld.blocks38 . create_1000G . gwascat.download . logsum . michailidou . michailidou19 . rapidopgs_multi . rapidopgs_single . sd.prior.est . sdY.est . wakefield_pp . wakefield_pp_quant . 
Some associated R codes: data.R . globals.R . rapfunc.R .  Full RapidoPGS package functions and examples
Downloads during the last 30 days
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