R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
NBBttest
View on CRAN: Click
here
Download and install NBBttest package within the R console
Install from CRAN:
install.packages("NBBttest")
Install from Github:
library("remotes")
install_github("cran/NBBttest")
Install by package version:
library("remotes")
install_version("NBBttest", "1.0.1")
Attach the package and use:
library("NBBttest")
Maintained by
Yuan-De Tan
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
First Published: 2020-06-25
Latest Update: 2022-05-29
Description:
We constructed 'NBBttest' for identifying genes or RNA isoforms differentially expressed between two conditions on RNA-seq count data. Package 'NBBttest' can perform data quality check, data normalization, differential analysis, annotation and graphic analysis. In differential analysis, 'NBBttest' can identify differentially expressed genes and differential RNA isoforms in alternative splicing sites and alternative polyadenylation sites, differential sgRNA, and differential CRISPR (clustered regularly interspaced short palindromic repeats) screening genes. In graphic analysis, 'NBBttest' provides two types of heatmaps to visualize differential expression at gene or isoform level using z-score and n-score and creates pathway heatmap. 'NBBttest' can plot differentially expressed exons within a specified gene. In addition, 'NBBttest' provides a tool for annotation of genes and exons. The methods used in 'NBBttest' were new statistical methods developed from Tan and others (2015) . The statistical methods are robust and very powerful in identifying genes or RNA isoforms differentially expressed between two conditions in small samples.
How to cite:
Yuan-De Tan (2020). NBBttest: Negative Binomial Beta t-Test. R package version 1.0.1, https://cran.r-project.org/web/packages/NBBttest. Accessed 28 Mar. 2025.
Other packages that cited NBBttest R package
View NBBttest citation profile
Other R packages that NBBttest depends,
imports, suggests or enhances
Functions, R codes and Examples using
the NBBttest R package
Some associated functions: DDX39_100 . NBBplot . NBBttest-package . QC . annotat . betaparametVP . betaparametab . betaparametw . betattest . exondata . gbetattest . gtfa . jkttcell . mbetattest . mtpvadjust . myheatmap . myheatmap2 . normalize . oddratio . omega . pathwayHeatmap . pathwy.A.up . pratio . prime3_PRP8_50 . result . sgRNA . simSplicing . simulat . skjt . smbetattest . subdata . upGAm .
Some associated R codes: NBBplot.R . QC.R . annotat.R . betaparametVP.R . betaparametab.R . betaparametw.R . betattest.R . gbetattest.R . mbetattest.R . mtpvadjust.R . myheatmap.R . myheatmap2.R . normalized.R . oddratio.R . omega.R . pathwayHeatmap.R . pratio.R . simulat.R . smbetattest.R . subdata.R . Full NBBttest package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
hts
Provides methods for analysing and forecasting hierarchical and
grouped time series. The available ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Earo Wang (view profile)
pleiotest
It performs a fast multi-trait genome-wide association analysis based on seemingly unrelated regress ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Fernando Aguate (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
spinifex
Data visualization tours animates linear projection of multivariate data as its basis (ie. orientat ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Nicholas Spyrison (view profile)
transfR
A geomorphology-based hydrological modelling for transferring streamflow measurements from gauged to ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Alban de Lavenne (view profile)
gripp
Set of functions designed to solve inverse problems. The direct problem is used to calculate a cost ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Jader Lugon Junior (view profile)
23,842
R Packages
207,311
Dependencies
64,420
Author Associations
23,781
Publication Badges
