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MDMAPR
View on CRAN: Click
here
Download and install MDMAPR package within the R console
Install from CRAN:
install.packages("MDMAPR")
Install from Github:
library("remotes")
install_github("cran/MDMAPR")
Install by package version:
library("remotes")
install_version("MDMAPR", "0.2.3")
Attach the package and use:
library("MDMAPR")
Maintained by
Alka Benawra
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All associated links for this package
First Published: 2021-02-26
Latest Update: 2021-06-23
Description:
Runs a Shiny web application that merges raw 'qPCR' fluorescence data with related
metadata to visualize species presence/absence detection patterns and assess data quality.
The application calculates threshold values from raw fluorescence data using a method based
on the second derivative method, Luu-The et al (2005) , and utilizes
the
How to cite:
Alka Benawra (2021). MDMAPR: Molecular Detection Mapping and Analysis Platform. R package version 0.2.3, https://cran.r-project.org/web/packages/MDMAPR. Accessed 03 Dec. 2024.
Previous versions and publish date:
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Other R packages that MDMAPR depends,
imports, suggests or enhances
Complete documentation for MDMAPR
Functions, R codes and Examples using
the MDMAPR R package
Some associated functions: addThresholdCq . dbInstance . dbVariables . formatRawFluorescenceFile . launchApp .
Some associated R codes: calculateThresholdValue.R . dbInstance.R . dbVariables.R . globals.R . launchApp.R . qPCRFileTransformation.R . shinyAppServer.R . shinyAppUI.R . th.cyc.R . Full MDMAPR package functions and examples
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