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MDMAPR  

Molecular Detection Mapping and Analysis Platform
View on CRAN: Click here


Download and install MDMAPR package within the R console
Install from CRAN:
install.packages("MDMAPR")

Install from Github:
library("remotes")
install_github("cran/MDMAPR")

Install by package version:
library("remotes")
install_version("MDMAPR", "0.2.3")



Attach the package and use:
library("MDMAPR")
Maintained by
Alka Benawra
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-02-26
Latest Update: 2021-06-23
Description:
Runs a Shiny web application that merges raw 'qPCR' fluorescence data with related metadata to visualize species presence/absence detection patterns and assess data quality. The application calculates threshold values from raw fluorescence data using a method based on the second derivative method, Luu-The et al (2005) , and utilizes the
How to cite:
Alka Benawra (2021). MDMAPR: Molecular Detection Mapping and Analysis Platform. R package version 0.2.3, https://cran.r-project.org/web/packages/MDMAPR. Accessed 31 Oct. 2026.
Previous versions and publish date:
0.1.0 (2021-02-26 11:00), 0.2.0 (2021-03-05 17:50), 0.2.1 (2021-03-30 07:30), 0.2.2 (2021-04-06 16:50), 0.2.3 (2021-06-23 06:20), (2026-07-09 08:09)
Other packages that cited MDMAPR R package
View MDMAPR citation profile
Other R packages that MDMAPR depends, imports, suggests or enhances
Complete documentation for MDMAPR
Functions, R codes and Examples using the MDMAPR R package
Some associated functions: addThresholdCq . dbInstance . dbVariables . formatRawFluorescenceFile . launchApp . 
Some associated R codes: calculateThresholdValue.R . dbInstance.R . dbVariables.R . globals.R . launchApp.R . qPCRFileTransformation.R . shinyAppServer.R . shinyAppUI.R . th.cyc.R .  Full MDMAPR package functions and examples
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