Other packages > Find by keyword >

HLAtools  

Toolkit for HLA Immunogenomics
View on CRAN: Click here


Download and install HLAtools package within the R console
Install from CRAN:
install.packages("HLAtools")

Install from Github:
library("remotes")
install_github("cran/HLAtools")

Install by package version:
library("remotes")
install_version("HLAtools", "1.6.3")



Attach the package and use:
library("HLAtools")
Maintained by
Steven Mack
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-07-26
Latest Update: 2025-07-21
Description:
A toolkit for the analysis and management of data for genes in the so-called "Human Leukocyte Antigen" (HLA) region. Functions extract reference data from the Anthony Nolan HLA Informatics Group/ImmunoGeneTics HLA 'GitHub' repository (ANHIG/IMGTHLA) <https://github.com/ANHIG/IMGTHLA>, validate Genotype List (GL) Strings, convert between UNIFORMAT and GL String Code (GLSC) formats, translate HLA alleles and GLSCs across ImmunoPolymorphism Database (IPD) IMGT/HLA Database release versions, identify differences between pairs of alleles at a locus, generate customized, multi-position sequence alignments, trim and convert allele-names across nomenclature epochs, and extend existing data-analysis methods.
How to cite:
Steven Mack (2024). HLAtools: Toolkit for HLA Immunogenomics. R package version 1.6.3, https://cran.r-project.org/web/packages/HLAtools. Accessed 05 Jun. 2026.
Previous versions and publish date:
1.1.1 (2024-07-26 21:40), 1.2.0 (2024-09-02 22:10), 1.3.0 (2024-11-14 06:20), 1.4.0 (2025-03-03 23:30), 1.6.2 (2025-05-02 00:40)
Other packages that cited HLAtools R package
View HLAtools citation profile
Other R packages that HLAtools depends, imports, suggests or enhances
Complete documentation for HLAtools
Functions, R codes and Examples using the HLAtools R package
Full HLAtools package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

ibb  
R Wrapper for Istanbul Municipality Open Data Portal
Call wrappers for Istanbul Metropolitan Municipality's Open Data Portal (Turkish: Istanbul B ...
Download / Learn more Package Citations See dependency  
msm  
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions for fitting continuous-time Markov and hidden Markov multi-state models to longitudinal d ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  
crossurr  
Cross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers
Doubly robust methods for evaluating surrogate markers as outlined in: Agniel D, Hejblum BP, Thiebau ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA