Other packages > Find by keyword >

GWASinspector  

Comprehensive and Easy to Use Quality Control of GWAS Results
View on CRAN: Click here


Download and install GWASinspector package within the R console
Install from CRAN:
install.packages("GWASinspector")

Install from Github:
library("remotes")
install_github("cran/GWASinspector")

Install by package version:
library("remotes")
install_version("GWASinspector", "1.7.3")



Attach the package and use:
library("GWASinspector")
Maintained by
Alireza Ani
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-02
Latest Update: 2025-03-30
Description:
When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.
How to cite:
Alireza Ani (2019). GWASinspector: Comprehensive and Easy to Use Quality Control of GWAS Results. R package version 1.7.3, https://cran.r-project.org/web/packages/GWASinspector. Accessed 08 Mar. 2026.
Previous versions and publish date:
1.1.2 (2019-08-02 11:20), 1.2 (2019-09-25 16:30), 1.3.4 (2019-12-01 21:30), 1.4.2 (2020-01-19 18:00), 1.4.3 (2020-02-18 16:50), 1.4.4 (2020-02-25 08:30), 1.4.5 (2020-03-15 08:20), 1.4.6.7 (2020-03-31 19:40), 1.4.6 (2020-03-23 11:40), 1.4.7.1 (2020-05-11 10:50), 1.4.7 (2020-04-22 16:22), 1.4.8.2 (2020-10-01 11:40), 1.4.8 (2020-07-28 11:42), 1.5.1 (2021-02-08 20:20), 1.5.2 (2021-03-22 22:40), 1.5.7.1 (2022-01-16 17:52), 1.5.7.2 (2022-04-27 19:30), 1.6.0 (2022-11-22 14:30), 1.6.1 (2023-01-09 18:33), 1.6.4 (2023-05-15 20:30), 1.6.5 (2023-09-27 22:00), 1.7.1 (2024-05-06 20:20), 1.7.3 (2025-03-30 15:50)
Other packages that cited GWASinspector R package
View GWASinspector citation profile
Other R packages that GWASinspector depends, imports, suggests or enhances
Complete documentation for GWASinspector
Functions, R codes and Examples using the GWASinspector R package
Some associated functions: GWASinspector . Inspector-class . Study-class . StudyList-class . compare.GWASs . demo.inspector . get.config . get.headerTranslation . manhattan.plot . result.inspector . run.inspector . setup.inspector . system.check . 
Some associated R codes: GWASinspector.R . QQPlotFunction.R . Study.R . aaa.R . alleleMatch.R . altReferenceRelatedFucntions.R . applyHQfilter.R . betaReferenceRelatedFunctions.R . calculationFunctions.R . checkConfigFile.R . class_definition.R . compare_GWASs.R . demoConfig.R . demo_inspector.R . drawPlots.R . effect_size_ref_make.R . effectsizePlotFunction.R . excelReportFunctions.R . fileFunctions.R . getConfig.R . getHeaderTranslation.R . headerRelatedFunctions.R . histPlotFunction.R . loggerFunctions.R . mafPlotFunction.R . manh_plot.R . manhattanPlotFunction.R . multiStudyFunctions.R . multiStudyPlots.R . pValueCorPlot.R . pValueFunctions.R . processColumnNames.R . processColumns.R . processInputFile.R . rSQLiteFunctions.R . referenceRelatedFunctions.R . reportRelatedFunctions.R . result_inspector.R . run_inspector.R . saveFilesFunctions.R . setGraphicDevice.R . setup_inspector.R . studyFunctions.R . suppFunctions.R . system_check.R . terminationFunctions.R . uploadInputFile.R . validate.R . variantMatching.R . variantMatchingFunctions.R . variantModifierFunctions.R . zzz.R .  Full GWASinspector package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

vars  
VAR Modelling
Estimation, lag selection, diagnostic testing, forecasting, causality analysis, forecast error varia ...
Download / Learn more Package Citations See dependency  
ptycho  
Bayesian Variable Selection with Hierarchical Priors
Bayesian variable selection for linear regression models using hierarchical priors. There is a pr ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
generator  
Generate Data Containing Fake Personally Identifiable Information
Allows users to quickly and easily generate fake data containing Personally Identifiable Informatio ...
Download / Learn more Package Citations See dependency  
candisc  
Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
Functions for computing and visualizing generalized canonical discriminant analyses and canonical c ...
Download / Learn more Package Citations See dependency  

26,270

R Packages

223,360

Dependencies

70,376

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA