Other packages > Find by keyword >

GCalignR  

Simple Peak Alignment for Gas-Chromatography Data
View on CRAN: Click here


Download and install GCalignR package within the R console
Install from CRAN:
install.packages("GCalignR")

Install from Github:
library("remotes")
install_github("cran/GCalignR")

Install by package version:
library("remotes")
install_version("GCalignR", "1.0.7")



Attach the package and use:
library("GCalignR")
Maintained by
Meinolf Ottensmann
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-02-06
Latest Update: 2024-07-03
Description:
Aligns peak based on peak retention times and matches homologous peaks across samples. The underlying alignment procedure comprises three sequential steps. (1) Full alignment of samples by linear transformation of retention times to maximise similarity among homologous peaks (2) Partial alignment of peaks within a user-defined retention time window to cluster homologous peaks (3) Merging rows that are likely representing homologous substances (i.e. no sample shows peaks in both rows and the rows have similar retention time means). The algorithm is described in detail in Ottensmann et al., 2018 .
How to cite:
Meinolf Ottensmann (2017). GCalignR: Simple Peak Alignment for Gas-Chromatography Data. R package version 1.0.7, https://cran.r-project.org/web/packages/GCalignR. Accessed 07 Mar. 2026.
Previous versions and publish date:
0.1.0 (2017-02-06 11:44), 1.0.0 (2017-09-15 00:28), 1.0.1 (2018-01-16 11:49), 1.0.2 (2018-07-16 12:00), 1.0.3 (2020-08-26 10:00), 1.0.5 (2023-01-26 20:20), 1.0.6 (2024-01-22 22:02)
Other packages that cited GCalignR R package
View GCalignR citation profile
Other R packages that GCalignR depends, imports, suggests or enhances
Complete documentation for GCalignR
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

SAMtool  
Stock Assessment Methods Toolkit
Simulation tools for closed-loop simulation are provided for the 'MSEtool' operating model to inform ...
Download / Learn more Package Citations See dependency  
portalr  
Create Useful Summaries of the Portal Data
Download and generate summaries for the rodent, plant, ant, and weather data from the Portal Projec ...
Download / Learn more Package Citations See dependency  
testDriveR  
Teaching Data for Statistics and Data Science
Provides data sets for teaching statistics and data science courses. It includes a sample of data f ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
ReviewR  
A Light-Weight, Portable Tool for Reviewing Individual Patient Records
A portable Shiny tool to explore patient-level electronic health record data and perform chart revi ...
Download / Learn more Package Citations See dependency  
lmSubsets  
Exact Variable-Subset Selection in Linear Regression
Exact and approximation algorithms for variable-subset selection in ordinary linear regression mode ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,376

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA