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Epi  

Statistical Analysis in Epidemiology
View on CRAN: Click here


Download and install Epi package within the R console
Install from CRAN:
install.packages("Epi")

Install from Github:
library("remotes")
install_github("cran/Epi")

Install by package version:
library("remotes")
install_version("Epi", "2.61")



Attach the package and use:
library("Epi")
Maintained by
Bendix Carstensen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2005-05-10
Latest Update: 2025-07-08
Description:
Functions for demographic and epidemiological analysis in the Lexis diagram, i.e. register and cohort follow-up data. In particular representation, manipulation, rate estimation and simulation for multistate data - the Lexis suite of functions, which includes interfaces to 'mstate', 'etm' and 'cmprsk' packages. Contains functions for Age-Period-Cohort and Lee-Carter modeling and a function for interval censored data and some useful functions for tabulation and plotting, as well as a number of epidemiological data sets.
How to cite:
Bendix Carstensen (2005). Epi: Statistical Analysis in Epidemiology. R package version 2.61, https://cran.r-project.org/web/packages/Epi. Accessed 16 Jul. 2026.
Previous versions and publish date:
0.1 (2005-05-10 10:00), 0.2 (2005-05-19 16:28), 0.4 (2005-06-16 18:09), 0.6.0 (2006-04-05 10:48), 0.6.2 (2006-09-29 12:43), 0.7.0 (2007-01-11 20:40), 1.0.5 (2008-01-08 10:09), 1.0.7 (2008-01-11 18:22), 1.0.8 (2008-05-02 10:58), 1.0.10 (2009-01-28 18:05), 1.0.12 (2009-04-30 08:43), 1.1.2 (2009-09-06 21:52), 1.1.7 (2009-09-30 20:56), 1.1.9 (2009-11-22 17:11), 1.1.10 (2009-12-24 11:42), 1.1.12 (2010-04-03 09:58), 1.1.14 (2010-05-22 07:22), 1.1.15 (2010-06-19 18:45), 1.1.17 (2010-09-01 19:38), 1.1.20 (2011-03-01 09:06), 1.1.24 (2011-07-25 21:46), 1.1.33 (2012-01-24 14:57), 1.1.34 (2012-03-29 10:24), 1.1.36 (2012-06-29 10:58), 1.1.40 (2012-11-05 16:05), 1.1.44 (2013-02-07 12:36), 1.1.49 (2013-05-15 10:46), 1.1.65 (2014-06-24 23:35), 1.1.67 (2014-07-23 12:12), 1.1.71 (2015-09-17 07:50), 2.0 (2016-01-06 20:29), 2.7 (2016-10-04 14:35), 2.10 (2017-02-23 23:34), 2.11 (2017-04-14 17:01), 2.12 (2017-04-16 12:57), 2.15 (2017-05-30 10:06), 2.16 (2017-07-01 00:56), 2.19 (2017-08-09 06:40), 2.24 (2018-01-30 23:54), 2.26 (2018-03-11 23:24), 2.28 (2018-04-25 14:13), 2.30 (2018-05-15 11:45), 2.32 (2018-08-23 07:44), 2.34 (2019-02-10 16:13), 2.35 (2019-03-01 14:50), 2.37 (2019-05-23 19:30), 2.38 (2019-08-07 11:10), 2.40 (2019-11-25 11:20), 2.41 (2020-08-07 07:22), 2.42 (2020-11-07 11:30), 2.43 (2021-01-27 13:20), 2.44 (2021-02-27 21:40), 2.46 (2022-04-13 13:02), 2.47.1 (2023-04-25 08:21), 2.47 (2022-06-26 23:20), 2.48 (2024-03-31 11:00), 2.50 (2024-05-27 18:10), 2.51 (2024-06-13 00:20), 2.52 (2024-07-10 12:30), 2.53 (2024-07-18 17:40), 2.55 (2024-09-11 01:40), 2.56 (2024-10-01 12:20), 2.57 (2024-11-16 23:30), 2.58 (2024-11-25 17:50), 2.59 (2025-01-13 15:30), 2.60 (2025-07-08 14:00), 2.61 (2025-10-07 07:10), 2.63 (2026-03-20 13:10), 2.64 (2026-03-26 14:30), (2026-07-09 08:03)
Other packages that cited Epi R package
View Epi citation profile
Other R packages that Epi depends, imports, suggests or enhances
Complete documentation for Epi
Functions, R codes and Examples using the Epi R package
Some associated functions: AaJ.Lexis . B.dk . BrCa . DMconv . DMepi . DMlate . Epi . Icens . LCa.fit . Lexis.diagram . Lexis.lines . Lexis . Lexis2msm . Life.lines . M.dk . N.dk . N2Y . NArray . Ns . ROC . Relevel . S.typh . Termplot . Y.dk . addCov.Lexis . addDrug.Lexis . apc.LCa . apc.fit . apc.frame . bdendo . births . blcaIT . bootLexis . boxes.MS . brv . cal.yr . ccwc . ci.Crisk . ci.cum . ci.lin . ci.pd . clogistic . contr.cum . crr.Lexis . cutLexis . detrend . diet . effx.match . effx . erl . ewrates . expand.data . fit.add . fit.baseline . fit.mult . float . foreign.Lexis . ftrend . gen.exp . gmortDK . harm . hivDK . in.span . lep . lgrep . lines.apc . lls . lungDK . mat2pol . matshade . mcutLexis . merge.Lexis . mh . mod.Lexis . mortDK . ncut . nice . nickel . occup . pc.lines . pctab . plot.Lexis . plot.apc . plotCIF . plotEst . plotevent . poisreg . pr . projection.ip . rateplot . rbind.Lexis . rcutLexis . rm.tr . simLexis . splitLexis . stack.Lexis . start.Lexis . stattable.funs . stattable . steno2 . subset.Lexis . summary.Lexis . testisDK . thoro . time.band . time.scales . transform.Lexis . twoby2 . 
Some associated R codes: AaJ.Lexis.R . Aplot.R . Cplot.R . Icens.R . LCa.fit.R . Lexis.diagram.R . Lexis.lines.R . Lexis2msm.R . Life.lines.R . NArray.R . Pplot.R . ROC.R . Relevel.Lexis.R . Relevel.R . Termplot.R . Wald.R . addCov.Lexis.R . addDrug.Lexis.R . apc.LCa.R . apc.fit.R . apc.frame.R . apc.plot.R . as.Date.cal.yr.R . bootLexis.R . boxes.MS.R . cal.yr.R . ccwc.R . ci.Crisk.R . ci.cum.R . ci.lin.R . ci.mat.R . ci.pd.R . clear.R . clogistic.R . coarse.Lexis.R . contr.2nd.R . contr.cum.R . contr.diff.R . contr.orth.R . cutLexis.R . detrend.R . erl.R . fit.baseline.R . float.R . foreign.R . ftrend.R . gen.exp.R . harm.R . lexis.R . lls.R . mat2pol.R . matshade.R . mcutLexis.R . mh.R . mod.Lexis.R . pctab.R . plotCIF.R . plotEst.R . poisreg.R . print.floated.R . rateplot.R . rcutLexis.R . rm.tr.R . simLexis.R . splitLexis.R . stack.Lexis.R . stackedCIF.R . stattable.R . twoby2.R . xgrep.R .  Full Epi package functions and examples
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