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DIME
View on CRAN: Click
here
Download and install DIME package within the R console
Install from CRAN:
install.packages("DIME")
Install from Github:
library("remotes")
install_github("cran/DIME")
Install by package version:
library("remotes")
install_version("DIME", "1.3.0")
Attach the package and use:
library("DIME")
Maintained by
Cenny Taslim
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2012-10-29
Latest Update: 2022-05-09
Description:
A robust identification of differential binding sites method for analyzing ChIP-seq (Chromatin Immunoprecipitation Sequencing)
comparing two samples that considers an ensemble of finite mixture models combined with a local false discovery rate (fdr)
allowing for flexible modeling of data. Methods for Differential Identification using Mixture Ensemble (DIME) is described in:
Taslim et al., (2011) .
How to cite:
Cenny Taslim (2012). DIME: Differential Identification using Mixture Ensemble. R package version 1.3.0, https://cran.r-project.org/web/packages/DIME. Accessed 22 Dec. 2024.
Previous versions and publish date:
Other packages that cited DIME R package
View DIME citation profile
Other R packages that DIME depends,
imports, suggests or enhances
Complete documentation for DIME
Functions, R codes and Examples using
the DIME R package
Some associated functions: DIME-package . DIME.classify . DIME . DIME.plot.fit . gng.classify . gng.fit . gng.plot.comp . gng.plot.fit . gng.plot.mix . gng.plot.qq . huber . inudge.classify . inudge.fit . inudge.plot.comp . inudge.plot.fit . inudge.plot.mix . inudge.plot.qq . nudge.classify . nudge.fit . nudge.plot.comp . nudge.plot.fit . nudge.plot.mix . nudge.plot.qq .
Some associated R codes: DIME.R . DIME.classify.R . DIME.plot.fit.R . gng.classify.R . gng.fit.R . gng.plot.comp.R . gng.plot.fit.R . gng.plot.mix.R . gng.plot.qq.R . gng.qq.plot.internal.R . huber.R . inudge.classify.R . inudge.fit.R . inudge.plot.comp.R . inudge.plot.fit.R . inudge.plot.mix.R . inudge.plot.qq.R . inudge.qq.plot.internal.R . nudge.classify.R . nudge.fit.R . nudge.plot.comp.R . nudge.plot.fit.R . nudge.plot.mix.R . nudge.plot.qq.R . Full DIME package functions and examples
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