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Biopeak  

Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data
View on CRAN: Click here


Download and install Biopeak package within the R console
Install from CRAN:
install.packages("Biopeak")

Install from Github:
library("remotes")
install_github("cran/Biopeak")

Install by package version:
library("remotes")
install_version("Biopeak", "1.0")



Attach the package and use:
library("Biopeak")
Maintained by
David Lauenstein
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-21
Latest Update: 2022-12-05
Description:
Enables the user to systematically identify and visualize impulse-like gene expression changes within short genomic series experiments. In order to detect such activation peaks the gene expression is treated as a signal that propagates along an experimental axis time temperature or other series conditions. Peaks are selected by exhaustive identification of local maximums and subsequent filtering based on a range of controllable parameters. Moreover the Biopeak package provides a series of data exploration tools including expression profile plots correlation heat maps and clustering functionalities.
How to cite:
David Lauenstein (2019). Biopeak: Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data. R package version 1.0, https://cran.r-project.org/web/packages/Biopeak. Accessed 28 Jan. 2025.
Previous versions and publish date:
1.0 (2019-08-21 11:40)
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