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ArchaeoPhases  

Post-Processing of Markov Chain Monte Carlo Simulations for Chronological Modelling
View on CRAN: Click here


Download and install ArchaeoPhases package within the R console
Install from CRAN:
install.packages("ArchaeoPhases")

Install from Github:
library("remotes")
install_github("cran/ArchaeoPhases")

Install by package version:
library("remotes")
install_version("ArchaeoPhases", "2.0")



Attach the package and use:
library("ArchaeoPhases")
Maintained by
Anne Philippe
[Scholar Profile | Author Map]
First Published: 2017-02-07
Latest Update: 2022-06-21
Description:
Provides a list of functions for the statistical analysis of archaeological dates and groups of dates. It is based on the post-processing of the Markov Chains whose stationary distribution is the posterior distribution of a series of dates. Such output can be simulated by different applications as for instance 'ChronoModel' (see ), 'Oxcal' (see ) or 'BCal' (see ). The only requirement is to have a csv file containing a sample from the posterior distribution. Note that this package interacts with data available through the 'ArchaeoPhases.dataset' package which is available in a separate repository. The size of the 'ArchaeoPhases.dataset' package is approximately 4 MB.
How to cite:
Anne Philippe (2017). ArchaeoPhases: Post-Processing of Markov Chain Monte Carlo Simulations for Chronological Modelling. R package version 2.0, https://cran.r-project.org/web/packages/ArchaeoPhases. Accessed 02 Apr. 2025.
Previous versions and publish date:
1.0 (2017-02-07 10:08), 1.1 (2017-03-27 16:02), 1.2 (2017-06-13 22:20), 1.3 (2017-09-28 17:16), 1.4.5 (2020-05-29 17:10), 1.4 (2019-01-02 10:10), 1.5 (2020-12-01 14:10), 1.6 (2022-02-17 00:20), 1.8 (2022-06-21 20:20)
Other packages that cited ArchaeoPhases R package
View ArchaeoPhases citation profile
Other R packages that ArchaeoPhases depends, imports, suggests or enhances
Complete documentation for ArchaeoPhases
Functions, R codes and Examples using the ArchaeoPhases R package
Some associated functions: AgeDepth . ArchaeoPhases . CreateMinMaxGroup . CredibleInterval . DatesHiatus . Events . ImportCSV.BCal . ImportCSV . MarginalPlot . MarginalProba . MarginalStatistics . MultiCredibleInterval . MultiDatesPlot . MultiHPD . MultiMarginalPlot . MultiPhasePlot . MultiPhaseTimeRange . MultiPhasesGap . MultiPhasesTransition . MultiSuccessionPlot . OccurrencePlot . PhaseDurationPlot . PhasePlot . PhaseStatistics . PhaseTimeRange . Phases . PhasesGap . PhasesTransition . SuccessionPlot . TempoActivityPlot . TempoPlot . allen_analyze . allen_basic_relation_set . allen_basic_relation_strings . allen_composition . allen_concurrent_relations . allen_create_concurrent_vector . allen_create_distinct_endpoint_vector . allen_create_result_vector . allen_ensure_set_vector . allen_illustrate . allen_is_result_vector . allen_is_set_string . allen_is_set_vector . allen_joint_concurrency . allen_lattice_x . allen_lattice_y . allen_observe . allen_observe_frequency . allen_plot . allen_proportion_result . allen_relate_intervals . allen_relation . allen_set_to_vector . allen_six_value_set . allen_string_to_set . allen_string_to_vector . allen_union . allen_update_result . analyze_allen_relations . app_ArchaeoPhases . coda.mcmc . composition_lookup_table . credible_interval . dates_hiatus . estimate_range . illustrate_allen_relations . is.url . marginal_plot . marginal_statistics . multi_credible_interval . multi_dates_plot . multi_hpd . multi_marginal_plot . multi_marginal_statistics . new_archaeophases_mcmc . new_archaeophases_plot . occurrence_plot . original_file.archaeophases_mcmc . original_file.archaeophases_plot . original_file . oxc . phase_statistics . phases_gap . plot.archaeophases_plot . read_bcal . read_chronomodel . read_oxcal . reproduce.archaeophases_mcmc . reproduce.archaeophases_plot . reproduce . tempo_activity_plot . tempo_plot . undated_sample . valid_url . 
Some associated R codes: AgeDepth.R . AllenAnalyze.R . AllenConcur.R . AllenDataFrame.R . AllenExpect.R . AllenIllustrate.R . AllenObserve.R . AllenPlot.R . ArchaeoPhases.R . CreateMinMaxGroup.R . CredibleInterval.R . DatesHiatus.R . ImportCSV.BCal.R . ImportCSV.R . MarginalPlot.R . MarginalProba.R . MarginalStatistics.R . MultiCredibleInterval.R . MultiDatesPlot.R . MultiHPD.R . MultiMarginalPlot.R . MultiPhasePlot.R . MultiPhaseTimeRange.R . MultiPhasesGap.R . MultiPhasesTransition.R . MultiSuccessionPlot.R . OccurrencePlot.R . PhaseDurationPlot.R . PhasePlot.R . PhaseStatistics.R . PhaseTimeRange.R . PhasesGap.R . PhasesTransition.R . S3Classes.R . Sensitivity.R . SuccessionPlot.R . TempoActivityPlot.R . TempoPlot.R . app_ArchaeoPhases.R . coda.mcmc.R . data.R . globals.R . undated_sample.R . zzz.R .  Full ArchaeoPhases package functions and examples
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