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xROI
View on CRAN: Click
here
Download and install xROI package within the R console
Install from CRAN:
install.packages("xROI")
Install from Github:
library("remotes")
install_github("cran/xROI")
Install by package version:
library("remotes")
install_version("xROI", "0.9.20")
Attach the package and use:
library("xROI")
Maintained by
Bijan Seyednasrollah
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-03-28
Latest Update: 2023-10-16
Description:
Digital repeat photography and near-surface remote sensing have been used by environmental scientists to study the environmental change for nearly a decade. However, a user-friendly, reliable, and robust platform to extract color-based statistics and time-series from a large stack of images is still lacking. Here, we present an interactive open-source toolkit, called 'xROI', that facilitate the process time-series extraction and improve the quality of the final data. 'xROI' provides a responsive environment for scientists to interactively a) delineate regions of interest (ROI), b) handle field of view (FOV) shifts, and c) extract and export time series data characterizing image color (i.e. red, green and blue channel digital numbers for the defined ROI). Using 'xROI', user can detect FOV shifts without minimal difficulty. The software gives user the opportunity to readjust the mask files or redraw new ones every time an FOV shift occurs. 'xROI' helps to significantly improve data accuracy and continuity.
How to cite:
Bijan Seyednasrollah (2018). xROI: Delineate Region of Interests (ROI"s) and Extract Time-Series
Data from Digital Repeat Photography Images. R package version 0.9.20, https://cran.r-project.org/web/packages/xROI. Accessed 03 Dec. 2024.
Previous versions and publish date:
Other packages that cited xROI R package
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Other R packages that xROI depends,
imports, suggests or enhances
Functions, R codes and Examples using
the xROI R package
Some associated functions: Launch . addMask . detectShifts . drawPolygon . extractCCC . extractCCCTimeSeries . getCL . getCLArray . gettmpdir . parsePhenocamFilenames . parseROI . plotCLArray . plotJPEG . rasterizeROI . writeROI .
Some associated R codes: Launch.R . addMask.R . detectShifts.R . drawPolygon.R . extractCCC.R . extractCCCTimeSeries.R . getCL.R . getCLArray.R . gettmpdir.R . parsePhenocamFilenames.R . parseROI.R . plotCLArray.R . plotJPEG.R . rasterizeROI.R . writeROI.R . zzz.R . Full xROI package functions and examples
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