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webSDM
View on CRAN: Click
here
Download and install webSDM package within the R console
Install from CRAN:
install.packages("webSDM")
Install from Github:
library("remotes")
install_github("cran/webSDM") Install by package version:
library("remotes")
install_version("webSDM", "1.1-5") Attach the package and use:
library("webSDM")
Maintained by
Giovanni Poggiato
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-11-25
Latest Update: 2024-06-24
Description:
A collection of tools to fit and work with trophic Species Distribution Models. Trophic Species Distribution Models combine knowledge of trophic interactions with Bayesian structural equation models that model each species as a function of its prey (or predators) and environmental conditions. It exploits the topological ordering of the known trophic interaction network to predict species distribution in space and/or time, where the prey (or predator) distribution is unavailable. The method implemented by the package is described in Poggiato, Andréoletti, Pollock and Thuiller (2022) <doi:10.22541/au.166853394.45823739/v1>.
How to cite:
Giovanni Poggiato (2022). webSDM: Including Known Interactions in Species Distribution Models. R package version 1.1-5, https://cran.r-project.org/web/packages/webSDM. Accessed 05 Jun. 2026.
Previous versions and publish date:
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Other R packages that webSDM depends,
imports, suggests or enhances
Complete documentation for webSDM
Functions, R codes and Examples using
the webSDM R package
Some associated functions: G . SDMfit . X . Y . buildFormula . coef.SDMfit . coef.trophicSDMfit . computeVariableImportance . evaluateModelFit . global . loo.trophicSDMfit . plot.SDMfit . plot.trophicSDMfit . plotG . plotG_inferred . predict.SDMfit . predict.trophicSDMfit . predictPotential . print.SDMfit . print.trophicSDMfit . summary.SDMfit . summary.trophicSDMfit . trophicSDM . trophicSDM_CV . webSDM-package .
Some associated R codes: SDMfit.R . SimulData.R . buildFormula.R . coef.SDMfit.R . coef.trophicSDMfit.R . computeVariableImportance.R . evaluateModelFit.R . global.R . loo.trophicSDMfit.R . plot.SDMfit.R . plot.trophicSDMfit.R . plotG.R . plotG_inferred.R . predict.SDMfit.R . predict.trophicSDMfit.R . predictPotential.R . print.SDMfit.R . print.trophicSDMfit.R . summary.SDMfit.R . summary.trophicSDMfit.R . trophicSDM.R . trophicSDM_CV.R . webSDM-package.R . Full webSDM package functions and examples
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