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waves
View on CRAN: Click
here
Download and install waves package within the R console
Install from CRAN:
install.packages("waves")
Install from Github:
library("remotes")
install_github("cran/waves")
Install by package version:
library("remotes")
install_version("waves", "0.2.5")
Attach the package and use:
library("waves")
Maintained by
Jenna Hershberger
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-09-17
Latest Update: 2023-12-12
Description:
Originally designed application in the context of resource-limited plant research and breeding programs, 'waves' provides an open-source solution to spectral data processing and model development by bringing useful packages together into a streamlined pipeline.This package is wrapper for functions related to the analysis of point visible and near-infrared reflectance measurements. It includes visualization, filtering, aggregation, preprocessing, cross-validation set formation, model training, and prediction functions to enable open-source association of spectral and reference data. This package is documented in a peer-reviewed manuscript in the Plant Phenome Journal <doi:10.1002/ppj2.20012>.Specialized cross-validation schemes are described in detail in Jarquín et al. (2017) <doi:10.3835/plantgenome2016.12.0130>. Example data is from Ikeogu et al. (2017) <doi:10.1371/journal.pone.0188918>.
How to cite:
Jenna Hershberger (2020). waves: Vis-NIR Spectral Analysis Wrapper. R package version 0.2.5, https://cran.r-project.org/web/packages/waves
Previous versions and publish date:
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imports, suggests or enhances
Functions, R codes and Examples using
the waves R package
Some associated functions: aggregate_spectra . filter_spectra . format_cv . get_mode . ikeogu.2017 . plot_spectra . predict_spectra . pretreat_spectra . rename . save_model . test_spectra . train_spectra .
Some associated R codes: aggregate_spectra.R . data.R . filter_spectra.R . format_cv.R . plot_spectra.R . predict_spectra.R . pretreat_spectra.R . rename.R . save_model.R . test_spectra.R . train_spectra.R . utils.R . Full waves package functions and examples
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