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wallace  

A Modular Platform for Reproducible Modeling of Species Niches and Distributions
View on CRAN: Click here


Download and install wallace package within the R console
Install from CRAN:
install.packages("wallace")

Install from Github:
library("remotes")
install_github("cran/wallace")

Install by package version:
library("remotes")
install_version("wallace", "2.1.3")



Attach the package and use:
library("wallace")
Maintained by
Mary E. Blair
[Scholar Profile | Author Map]
First Published: 2017-01-24
Latest Update: 2023-09-03
Description:
The 'shiny' application Wallace is a modular platform for reproducible modeling of species niches and distributions. Wallace guides users through a complete analysis, from the acquisition of species occurrence and environmental data to visualizing model predictions on an interactive map, thus bundling complex workflows into a single, streamlined interface. An extensive vignette, which guides users through most package functionality can be found on the package's GitHub Pages website: <https://wallaceecomod.github.io/wallace/articles/tutorial-v2.html>.
How to cite:
Mary E. Blair (2017). wallace: A Modular Platform for Reproducible Modeling of Species Niches and Distributions. R package version 2.1.3, https://cran.r-project.org/web/packages/wallace. Accessed 25 Feb. 2025.
Previous versions and publish date:
0.6.1 (2017-01-24 15:43), 0.6.2 (2017-02-01 08:34), 0.6.3 (2017-02-03 08:13), 0.6.4 (2017-06-01 05:47), 1.0.1 (2017-11-30 00:43), 1.0.2 (2017-12-15 06:09), 1.0.3 (2018-01-31 07:11), 1.0.4 (2018-02-12 22:39), 1.0.5 (2018-06-22 20:49), 1.0.6.2 (2020-02-13 23:30), 1.0.6.3 (2020-12-06 06:40), 1.0.6 (2018-10-07 22:10), 1.0 (2017-11-26 05:07), 1.1.0 (2021-05-24 18:20), 1.1.2 (2022-02-13 04:50), 1.1.3 (2022-03-09 18:40), 2.0.0 (2022-12-08 18:40), 2.0.1 (2022-12-15 23:40), 2.0.2 (2023-01-05 18:30), 2.0.3 (2023-01-16 23:30), 2.0.4 (2023-03-14 09:20), 2.0.5 (2023-04-15 07:50), 2.0.6 (2023-09-15 00:20), 2.1.0 (2023-09-26 02:10), 2.1.1 (2023-12-07 18:30), 2.1.2 (2024-03-09 02:20)
Other packages that cited wallace R package
View wallace citation profile
Other R packages that wallace depends, imports, suggests or enhances
Complete documentation for wallace
Functions, R codes and Examples using the wallace R package
Some associated functions: clearAll . create_module . ecoClimate_getdata . ecoClimate_select . ecospat.plot.nicheDEV . envs_ecoClimate . envs_userEnvs . envs_worldclim . espace_nicheOv . espace_occDens . espace_pca . fmtSpN . getRasterVals . hlSpp . model_bioclim . model_maxent . mxNonzeroCoefs . occs_queryDb . occs_userOccs . part_partitionOccs . penvs_bgExtent . penvs_bgMask . penvs_bgSample . penvs_drawBgExtent . penvs_userBgExtent . poccs_removeByID . poccs_selectOccs . poccs_thinOccs . polyZoom . popUpContent . predictMaxnet . printVecAsis . register_module . remEnvsValsNA . reverseLabel . run_wallace . smartProgress . spName . spurious . vis_bioclimPlot . wallace-package . writeLog . write_csv_robust . xfer_area . xfer_draw . xfer_mess . xfer_time . xfer_userEnvs . xfer_userExtent . zoom2Occs . 
Some associated R codes: custom_modules.R . envs_ecoClimate.R . envs_userEnvs.R . envs_worldclim.R . espace_nicheOv.R . espace_occDens.R . espace_pca.R . helper_functions.R . model_bioclim.R . model_maxent.R . occs_paleoDb.R . occs_queryDb.R . occs_userOccs.R . part_partitionOccs.R . penvs_bgExtent.R . penvs_bgMask.R . penvs_bgSample.R . penvs_drawBgExtent.R . penvs_userBgExtent.R . poccs_removeByID.R . poccs_selectOccs.R . poccs_thinOccs.R . run_wallace.R . vis_bioclimPlot.R . wallace-package.R . xfer_area.R . xfer_draw.R . xfer_mess.R . xfer_time.R . xfer_userEnvs.R . xfer_userExtent.R .  Full wallace package functions and examples
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