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vmeasur
View on CRAN: Click
here
Download and install vmeasur package within the R console
Install from CRAN:
install.packages("vmeasur")
Install from Github:
library("remotes")
install_github("cran/vmeasur")
Install by package version:
library("remotes")
install_version("vmeasur", "0.1.4")
Attach the package and use:
library("vmeasur")
Maintained by
James JW Hucklesby
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-11-11
Latest Update: 2021-11-11
Description:
A variety of tools to allow the quantification of videos of the lymphatic vasculature taken under an operating microscope. Lymphatic vessels that have been injected with a variety of blue dyes can be tracked throughout the video to determine their width over time. Code is optimised for efficient processing of multiple large video files. Functions to calculate physiologically relevant parameters and generate graphs from these values are also included.
How to cite:
James JW Hucklesby (2021). vmeasur: Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope. R package version 0.1.4, https://cran.r-project.org/web/packages/vmeasur. Accessed 13 May. 2025.
Previous versions and publish date:
No previous versions
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Other R packages that vmeasur depends,
imports, suggests or enhances
Complete documentation for vmeasur
Functions, R codes and Examples using
the vmeasur R package
Some associated functions: calibrate_pixel_size . example_vessel . output_dir . quantify_directory . quantify_mean_width . quantify_mean_width_sections . quantify_width_position . scratch_dir . select_roi . threshold_apply . threshold_vessel .
Some associated R codes: Bulk_Graphing_V2.R . Scale_detection.R . bulk_import_quantify.R . calculate_physiological_paramaters.R . example_flow.R . file_import_bulk.R . filename_manipulation.R . find_peaks_v3.R . group_contractions.R . multiple_processing_threshold_v3.R . quantify_directory.R . roi_select.R . thresholding.R . utility_functions.R . Full vmeasur package functions and examples
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