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visPedigree  

Tidying, Analysis, and Fast Visualization of Animal and Plant Pedigrees
View on CRAN: Click here


Download and install visPedigree package within the R console
Install from CRAN:
install.packages("visPedigree")

Install from Github:
library("remotes")
install_github("cran/visPedigree")

Install by package version:
library("remotes")
install_version("visPedigree", "1.10.1")



Attach the package and use:
library("visPedigree")
Maintained by
Sheng Luan
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-01-21
Latest Update: 2026-01-21
Description:
Built on graph theory and the high-performance 'data.table' framework, this package provides a comprehensive suite of tools for tidying, pruning, and visualizing animal pedigrees. By modeling pedigrees as directed acyclic graphs using 'igraph', it ensures robust loop detection, efficient generation assignment, and sophisticated hierarchical layouts. Key features include standardizing pedigree formats, flexible ancestry tracing, and generating legible vector-based PDF graphs. A unique compaction algorithm enables the visualization of massive pedigrees (e.g., in aquaculture selective breeding population) by grouping full-sib families, maintaining structural clarity without overcrowding.
How to cite:
Sheng Luan (2026). visPedigree: Tidying, Analysis, and Fast Visualization of Animal and Plant Pedigrees. R package version 1.10.1, https://cran.r-project.org/web/packages/visPedigree. Accessed 25 Oct. 2026.
Previous versions and publish date:
(2026-09-24 13:20), 0.7.1 (2026-01-21 21:10), 1.0.1 (2026-02-23 09:30), 1.8.1 (2026-03-30 09:30), 1.9.0 (2026-07-15 07:30)
Other packages that cited visPedigree R package
View visPedigree citation profile
Other R packages that visPedigree depends, imports, suggests or enhances
Complete documentation for visPedigree
Functions, R codes and Examples using the visPedigree R package
Full visPedigree package functions and examples
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