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vhica  

Vertical and Horizontal Inheritance Consistence Analysis
View on CRAN: Click here


Download and install vhica package within the R console
Install from CRAN:
install.packages("vhica")

Install from Github:
library("remotes")
install_github("cran/vhica")

Install by package version:
library("remotes")
install_version("vhica", "0.2.8")



Attach the package and use:
library("vhica")
Maintained by
Arnaud Le Rouzic
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-04-05
Latest Update: 2023-03-08
Description:
The "Vertical and Horizontal Inheritance Consistence Analysis" method is described in the following publication: "VHICA: a new method to discriminate between vertical and horizontal transposon transfer: application to the mariner family within Drosophila" by G. Wallau. et al. (2016) <doi:10.1093/molbev/msv341>. The purpose of the method is to detect horizontal transfers of transposable elements, by contrasting the divergence of transposable element sequences with that of regular genes.
How to cite:
Arnaud Le Rouzic (2016). vhica: Vertical and Horizontal Inheritance Consistence Analysis. R package version 0.2.8, https://cran.r-project.org/web/packages/vhica. Accessed 07 Nov. 2024.
Previous versions and publish date:
0.2.4 (2016-04-05 10:22), 0.2.7 (2020-03-02 11:20)
Other packages that cited vhica R package
View vhica citation profile
Other R packages that vhica depends, imports, suggests or enhances
Complete documentation for vhica
Functions, R codes and Examples using the vhica R package
Some associated functions: CUB . div . image.vhica . plot.vhica . read.vhica . summary.vhicaimage . vhica-package . 
Some associated R codes: CUB.R . div.R . image.vhica.R . plot.vhica.R . read.vhica.R . summary.vhicaimage.R . vhica-internal.R .  Full vhica package functions and examples
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