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vcfppR  

Rapid Manipulation of the Variant Call Format (VCF)
View on CRAN: Click here


Download and install vcfppR package within the R console
Install from CRAN:
install.packages("vcfppR")

Install from Github:
library("remotes")
install_github("cran/vcfppR")

Install by package version:
library("remotes")
install_version("vcfppR", "0.8.2")



Attach the package and use:
library("vcfppR")
Maintained by
Zilong Li
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-12-14
Latest Update: 2025-08-28
Description:
The 'vcfpp.h' (<https://github.com/Zilong-Li/vcfpp>) provides an easy-to-use 'C++' 'API' of 'htslib', offering full functionality for manipulating Variant Call Format (VCF) files. The 'vcfppR' package serves as the R bindings of the 'vcfpp.h' library, enabling rapid processing of both compressed and uncompressed VCF files. Explore a range of powerful features for efficient VCF data manipulation.
How to cite:
Zilong Li (2023). vcfppR: Rapid Manipulation of the Variant Call Format (VCF). R package version 0.8.2, https://cran.r-project.org/web/packages/vcfppR. Accessed 09 Mar. 2026.
Previous versions and publish date:
0.3.5 (2023-12-14 17:30), 0.3.8 (2024-01-14 18:10), 0.4.0 (2024-02-26 15:00), 0.4.3 (2024-03-27 18:30), 0.4.5 (2024-04-08 09:30), 0.4.6 (2024-05-24 11:20), 0.5.0 (2024-09-22 11:20), 0.6.0 (2024-09-30 00:40), 0.7.0 (2024-12-21 12:20), 0.7.1 (2024-12-26 13:20), 0.7.6 (2025-03-31 10:10), 0.8.0 (2025-07-02 15:50), 0.8.1 (2025-08-25 14:30)
Other packages that cited vcfppR R package
View vcfppR citation profile
Other R packages that vcfppR depends, imports, suggests or enhances
Complete documentation for vcfppR
Functions, R codes and Examples using the vcfppR R package
Some associated functions: heterozygosity . vcfpopgen . vcfppR-package . vcfreader . vcfsummary . vcftable . vcfwriter . 
Some associated R codes: RcppExports.R . vcf-popgen.R . vcf-summary.R . vcf-tables.R . vcfppR-package.R . zzz.R .  Full vcfppR package functions and examples
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