Other packages > Find by keyword >

uwot  

The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction
View on CRAN: Click here


Download and install uwot package within the R console
Install from CRAN:
install.packages("uwot")

Install from Github:
library("remotes")
install_github("cran/uwot")

Install by package version:
library("remotes")
install_version("uwot", "0.2.4")



Attach the package and use:
library("uwot")
Maintained by
James Melville
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-04-06
Latest Update: 2025-02-24
Description:
An implementation of the Uniform Manifold Approximation and Projection dimensionality reduction by McInnes et al. (2018) <doi:10.48550/arXiv.1802.03426>. It also provides means to transform new data and to carry out supervised dimensionality reduction. An implementation of the related LargeVis method of Tang et al. (2016) <doi:10.48550/arXiv.1602.00370> is also provided. This is a complete re-implementation in R (and C++, via the 'Rcpp' package): no Python installation is required. See the uwot website (<https://github.com/jlmelville/uwot>) for more documentation and examples.
How to cite:
James Melville (2019). uwot: The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction. R package version 0.2.4, https://cran.r-project.org/web/packages/uwot. Accessed 15 Jul. 2026.
Previous versions and publish date:
(2026-07-09 06:58), 0.1.2 (2019-04-06 13:40), 0.1.3 (2019-04-08 00:40), 0.1.4 (2019-09-23 10:20), 0.1.5 (2019-12-04 17:20), 0.1.8 (2020-03-16 13:20), 0.1.9 (2020-11-15 21:00), 0.1.10 (2020-12-15 14:40), 0.1.11 (2021-12-02 09:00), 0.1.13 (2022-08-16 15:00), 0.1.14 (2022-08-22 10:00), 0.1.15 (2023-06-26 13:40), 0.1.16 (2023-06-29 15:00), 0.2.1 (2024-04-15 17:40), 0.2.2 (2024-04-21 23:20), 0.2.3 (2025-02-24 07:30)
Other packages that cited uwot R package
View uwot citation profile
Other R packages that uwot depends, imports, suggests or enhances
Complete documentation for uwot
Functions, R codes and Examples using the uwot R package
Some associated functions: load_uwot . lvish . optimize_graph_layout . save_uwot . similarity_graph . simplicial_set_intersect . simplicial_set_union . tumap . umap . umap_transform . unload_uwot . 
Some associated R codes: RcppExports.R . affinity.R . bigstatsr_init.R . init.R . neighbors.R . rspectra_init.R . supervised.R . transform.R . util.R . uwot.R .  Full uwot package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
pulseTD  
Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
A tool for analyzing the transcription, processing and degradation rates of genes by 4sU-seq (the Me ...
Download / Learn more Package Citations See dependency  
footBayes  
Fitting Bayesian and MLE Football Models
This is the first package allowing for the estimation, visualization and prediction of the most wel ...
Download / Learn more Package Citations See dependency  
gamlss.add  
Extra Additive Terms for Generalized Additive Models for Location Scale and Shape
Interface for extra smooth functions including tensor products, neural networks and decision trees. ...
Download / Learn more Package Citations See dependency  
SECFISH  
Disaggregate Variable Costs
These functions were developed within SECFISH project (Strengthening regional cooperation in the are ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA