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uwot  

The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction
View on CRAN: Click here


Download and install uwot package within the R console
Install from CRAN:
install.packages("uwot")

Install from Github:
library("remotes")
install_github("cran/uwot")

Install by package version:
library("remotes")
install_version("uwot", "0.2.3")



Attach the package and use:
library("uwot")
Maintained by
James Melville
[Scholar Profile | Author Map]
First Published: 2019-04-06
Latest Update: 2023-06-29
Description:
An implementation of the Uniform Manifold Approximation and Projection dimensionality reduction by McInnes et al. (2018) <doi:10.48550/arXiv.1802.03426>. It also provides means to transform new data and to carry out supervised dimensionality reduction. An implementation of the related LargeVis method of Tang et al. (2016) <doi:10.48550/arXiv.1602.00370> is also provided. This is a complete re-implementation in R (and C++, via the 'Rcpp' package): no Python installation is required. See the uwot website (<https://github.com/jlmelville/uwot>) for more documentation and examples.
How to cite:
James Melville (2019). uwot: The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction. R package version 0.2.3, https://cran.r-project.org/web/packages/uwot. Accessed 11 Apr. 2025.
Previous versions and publish date:
0.1.2 (2019-04-06 13:40), 0.1.3 (2019-04-08 00:40), 0.1.4 (2019-09-23 10:20), 0.1.5 (2019-12-04 17:20), 0.1.8 (2020-03-16 13:20), 0.1.9 (2020-11-15 21:00), 0.1.10 (2020-12-15 14:40), 0.1.11 (2021-12-02 09:00), 0.1.13 (2022-08-16 15:00), 0.1.14 (2022-08-22 10:00), 0.1.15 (2023-06-26 13:40), 0.1.16 (2023-06-29 15:00), 0.2.1 (2024-04-15 17:40), 0.2.2 (2024-04-21 23:20)
Other packages that cited uwot R package
View uwot citation profile
Other R packages that uwot depends, imports, suggests or enhances
Complete documentation for uwot
Functions, R codes and Examples using the uwot R package
Some associated functions: load_uwot . lvish . optimize_graph_layout . save_uwot . similarity_graph . simplicial_set_intersect . simplicial_set_union . tumap . umap . umap_transform . unload_uwot . 
Some associated R codes: RcppExports.R . affinity.R . bigstatsr_init.R . init.R . neighbors.R . rspectra_init.R . supervised.R . transform.R . util.R . uwot.R .  Full uwot package functions and examples
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