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ushr
View on CRAN: Click
here
Download and install ushr package within the R console
Install from CRAN:
install.packages("ushr")
Install from Github:
library("remotes")
install_github("cran/ushr")
Install by package version:
library("remotes")
install_version("ushr", "0.2.3")
Attach the package and use:
library("ushr")
Maintained by
Sinead E. Morris
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.ushr . https://github.com/SineadMorris/ushr . ushr citation info . ushr results . ushr.pdf . ushr . ushr_0.2.3.tar.gz . ushr_0.2.3.zip . ushr_0.2.3.zip . ushr_0.2.3.zip . ushr_0.2.3.tgz . ushr_0.2.3.tgz . ushr_0.2.3.tgz . ushr_0.2.3.tgz . ushr_0.2.3.tgz . ushr_0.2.3.tgz . ushr archive . https://CRAN.R-project.org/package=ushr .
First Published: 2019-10-09
Latest Update: 2020-04-21
Description:
Analyzes longitudinal data of HIV decline in patients on antiretroviral therapy using the canonical biphasic exponential decay model (pioneered, for example, by work in Perelson et al. (1997) <doi:10.1038/387188a0>; and Wu and Ding (1999) <doi:10.1111/j.0006-341X.1999.00410.x>). Model fitting and parameter estimation are performed, with additional options to calculate the time to viral suppression. Plotting and summary tools are also provided for fast assessment of model results.
How to cite:
Sinead E. Morris (2019). ushr: Understanding Suppression of HIV. R package version 0.2.3, https://cran.r-project.org/web/packages/ushr. Accessed 09 Apr. 2025.
Previous versions and publish date:
Other packages that cited ushr R package
View ushr citation profile
Other R packages that ushr depends,
imports, suggests or enhances
Complete documentation for ushr
Functions, R codes and Examples using
the ushr R package
Some associated functions: actg315raw . add_noise . biphasic_root . filter_data . filter_dataTTS . fit_model . fit_model_triphasic . get_CI . get_CItable . get_TTS . get_biphasic . get_curve . get_error . get_error_triphasic . get_nonparametricTTS . get_optim_fit . get_optim_fit_triphasic . get_parametricTTS . get_params . get_plottheme . get_singlephase . get_transformed_params . get_triphasic . plot_TTS . plot_data . plot_model . plot_pairs . remove_vl0 . simulate_data . simulate_time . simulate_time_fixed . simulate_vl . single_root . summarize_model . switch_params . switch_simulated_params . transformVL . tri_switch_params . triphasic_root . ushr . ushr_triphasic .
Some associated R codes: actg315_data.R . fitting_fns.R . fitting_fns_triphasic.R . get_TTS.R . get_model_output.R . globals.R . input_processing.R . master_fn.R . master_fn_triphasic.R . model_fns.R . output_processing.R . simulate_data.R . transformation_fns.R . Full ushr package functions and examples
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