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tsiR  

An Implementation of the TSIR Model
View on CRAN: Click here


Download and install tsiR package within the R console
Install from CRAN:
install.packages("tsiR")

Install from Github:
library("remotes")
install_github("cran/tsiR")

Install by package version:
library("remotes")
install_version("tsiR", "0.4.3")



Attach the package and use:
library("tsiR")
Maintained by
Alexander D. Becker
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-02-17
Latest Update: 2021-01-20
Description:
An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here <doi:10.1371/journal.pone.0185528>. The method implemented here is described by Finkenstadt and Grenfell (2000) <doi:10.1111/1467-9876.00187>.
How to cite:
Alexander D. Becker (2017). tsiR: An Implementation of the TSIR Model. R package version 0.4.3, https://cran.r-project.org/web/packages/tsiR. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.1.0 (2017-02-17 14:38), 0.2.0 (2017-05-24 00:05), 0.3.0 (2017-08-14 23:55), 0.4.0 (2018-12-20 18:10), 0.4.1 (2019-01-30 00:00), 0.4.2 (2019-07-09 13:20)
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Complete documentation for tsiR
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