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toxEval
View on CRAN: Click
here
Download and install toxEval package within the R console
Install from CRAN:
install.packages("toxEval")
Install from Github:
library("remotes")
install_github("cran/toxEval")
Install by package version:
library("remotes")
install_version("toxEval", "1.3.2")
Attach the package and use:
library("toxEval")
Maintained by
Laura DeCicco
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-03-06
Latest Update: 2023-04-14
Description:
Data analysis package for estimating potential biological effects from chemical concentrations in environmental samples. Included are a set of functions to analyze, visualize, and organize measured concentration data as it relates to user-selected chemical-biological interaction benchmark data such as water quality criteria. The intent of these analyses is to develop a better understanding of the potential biological relevance of environmental chemistry data. Results can be used to prioritize which chemicals at which sites may be of greatest concern. These methods are meant to be used as a screening technique to predict potential for biological influence from chemicals that ultimately need to be validated with direct biological assays. A description of the analysis can be found in Blackwell (2017) <doi:10.1021/acs.est.7b01613>.
How to cite:
Laura DeCicco (2019). toxEval: Exploring Biological Relevance of Environmental Chemistry Observations. R package version 1.3.2, https://cran.r-project.org/web/packages/toxEval
Previous versions and publish date:
Other packages that cited toxEval R package
View toxEval citation profile
Other R packages that toxEval depends,
imports, suggests or enhances
Functions, R codes and Examples using
the toxEval R package
Some associated functions: ToxCast_ACC . clean_endPoint_info . createLink . create_toxEval . end_point_info . endpoint_hits_DT . explore_endpoints . filter_groups . get_ACC . get_chemical_summary . get_concentration_summary . graph_data_prep . helperToxEval . hits_by_groupings_DT . hits_summary_DT . make_tox_map . plot_tox_boxplots . plot_tox_endpoints . plot_tox_heatmap . plot_tox_stacks . rank_sites_DT . remove_flags . summary.toxEval . toxEval-package . tox_chemicals .
Some associated R codes: clean_endPoint_info.R . create_toxEval.R . endpoint_hits.R . explore_endpoints.R . filter_endPoint_info.R . get_ACC.R . get_chemical_summary.R . hits_by_groupings.R . hits_summary.R . makeMap.R . plot_chemical_boxplots.R . plot_group_boxplots.R . plot_heat_chemical.R . plot_tox_endpoints.R . plot_tox_stacks.R . rank_sites.R . side_by_side.R . toxEval.R . Full toxEval package functions and examples
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