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tidyHeatmap
View on CRAN: Click
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Download and install tidyHeatmap package within the R console
Install from CRAN:
install.packages("tidyHeatmap")
Install from Github:
library("remotes")
install_github("cran/tidyHeatmap")
Install by package version:
library("remotes")
install_version("tidyHeatmap", "1.8.1")
Attach the package and use:
library("tidyHeatmap")
Maintained by
Stefano Mangiola
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-02-23
Latest Update: 2022-05-20
Description:
This is a tidy implementation for heatmap.At the moment it is based on the (great) package 'ComplexHeatmap'.The goal of this package is to interface a tidy data frame with this powerful tool.Some of the advantages are: Row and/or columns colour annotations are easy to integrate just specifying one parameter (column names).Custom grouping of rows is easy to specify providing a grouped tbl. For example: df %>% group_by(...).Labels size adjusted by row and column total number.Default use of Brewer and Viridis palettes.
How to cite:
Stefano Mangiola (2020). tidyHeatmap: A Tidy Implementation of Heatmap. R package version 1.8.1, https://cran.r-project.org/web/packages/tidyHeatmap. Accessed 22 Dec. 2024.
Previous versions and publish date:
Other packages that cited tidyHeatmap R package
View tidyHeatmap citation profile
Other R packages that tidyHeatmap depends,
imports, suggests or enhances
Complete documentation for tidyHeatmap
Functions, R codes and Examples using
the tidyHeatmap R package
Some associated functions: N52 . add_annotation . add_attr . add_bar-method . add_class . add_line-method . add_point-method . add_tile-method . annot_to_list . as_ComplexHeatmap-method . as_matrix . check_if_counts_is_na . check_if_duplicated_genes . check_if_wrong_input . drop_class . error_if_log_transformed . get_abundance_norm_if_exists . get_elements . get_elements_features . get_elements_features_abundance . get_sample_counts . get_sample_transcript . get_sample_transcript_counts . get_x_y_annotation_columns . heatmap-method . ifelse2_pipe . ifelse_pipe . input_heatmap . layer_arrow_down-method . layer_arrow_up-method . layer_diamond-method . layer_point-method . layer_square-method . parse_formula . pasilla . prepend . quo_names . save_pdf-Heatmap-method . save_pdf-InputHeatmap-method . save_pdf-methods . scale_design . scale_robust . select_closest_pairs . split-methods . wrap_heatmap-method .
Some associated R codes: data.R . deprecated_framework.R . functions.R . ggsave.R . methods.R . patchwork.R . subset.R . utilities.R . validation.R . zzz.R . Full tidyHeatmap package functions and examples
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