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taxify  

Offline Taxonomic Name Matching Against Darwin Core Backbones
View on CRAN: Click here


Download and install taxify package within the R console
Install from CRAN:
install.packages("taxify")

Install from Github:
library("remotes")
install_github("cran/taxify")

Install by package version:
library("remotes")
install_version("taxify", "0.5.5")



Attach the package and use:
library("taxify")
Maintained by
Gilles Colling
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-06-30
Latest Update: 2026-06-30
Description:
Match taxonomic names against locally stored Darwin Core backbone databases ('WFO', 'COL', 'GBIF', 'ITIS', 'NCBI Taxonomy', 'Open Tree of Life', 'WoRMS', 'Species Fungorum', 'AlgaeBase'). Provides offline fuzzy and exact matching with synonym resolution, hybrid name detection, and a unified output schema across all sources. All heavy computation runs in the 'vectra' C11 columnar engine.
How to cite:
Gilles Colling (2026). taxify: Offline Taxonomic Name Matching Against Darwin Core Backbones. R package version 0.5.5, https://cran.r-project.org/web/packages/taxify. Accessed 24 Oct. 2026.
Previous versions and publish date:
(2026-09-30 23:21), 0.2.12 (2026-06-30 13:30), 0.3.4 (2026-07-09 10:50), 0.4.0 (2026-07-23 13:00), 0.5.0 (2026-09-02 09:10), 0.5.5 (2026-09-18 08:40)
Other packages that cited taxify R package
View taxify citation profile
Other R packages that taxify depends, imports, suggests or enhances
Complete documentation for taxify
Functions, R codes and Examples using the taxify R package
Full taxify package functions and examples
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