Other packages > Find by keyword >

tagtools  

Work with Data from High-Resolution Biologging Tags
View on CRAN: Click here


Download and install tagtools package within the R console
Install from CRAN:
install.packages("tagtools")

Install from Github:
library("remotes")
install_github("cran/tagtools")

Install by package version:
library("remotes")
install_version("tagtools", "0.2.0")



Attach the package and use:
library("tagtools")
Maintained by
Stacy DeRuiter
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-07-18
Latest Update: 2023-07-18
Description:
High-resolution movement-sensor tags typically include accelerometers to measure body posture and sudden movements or changes in speed, magnetometers to measure direction of travel, and pressure sensors to measure dive depth in aquatic or marine animals. The sensors in these tags usually sample many times per second. Some tags include sensors for speed, turning rate (gyroscopes), and sound. This package provides software tools to facilitate calibration, processing, and analysis of such data. Tools are provided for: data import/export; calibration (from raw data to calibrated data in scientific units); visualization (for example, multi-panel time-series plots); data processing (such as event detection, calculation of derived metrics like jerk and dynamic acceleration, dive detection, and dive parameter calculation); and statistical analysis (for example, track reconstruction, a rotation test, and Mahalanobis distance analysis).
How to cite:
Stacy DeRuiter (2023). tagtools: Work with Data from High-Resolution Biologging Tags. R package version 0.2.0, https://cran.r-project.org/web/packages/tagtools. Accessed 21 Nov. 2024.
Previous versions and publish date:
0.1.0 (2023-07-18 11:10)
Other packages that cited tagtools R package
View tagtools citation profile
Other R packages that tagtools depends, imports, suggests or enhances
Complete documentation for tagtools
Functions, R codes and Examples using the tagtools R package
Some associated functions: a2pr . absorption . acc_wgs84 . add_nc . apply_cal . beaked_whale . block_acf . block_mean . block_rms . body_axes . buffer . check_AM . cline . col_line . col_line3 . comp_filt . crop . crop_all . crop_to . csv2struct . decdc . decz . depth2pressure . depth_rate . detect_peaks . dive_stats . draw_axis . dsf . euler2rotmat . extract . extract_cues . find_dives . fir_nodelay . fit_tracks . fix_offset_3d . fix_pressure . get_researcher . get_species . harbor_seal . hilbert_env . hilbert_transform . htrack . image_irreg . inclination . interp2length . interp_nan . inv_axis . julian_day . lalo2llf . load_nc . m2h . m_dist . make_info . make_specgram . mean_absorption . median_filter . merge_fields . metadata_editor . msa . njerk . norm2 . ocdr . odba . plott . prh_predictor1 . prh_predictor2 . ptrack . read_cats . read_cats_csv . rotate_data . rotate_vecs . rotation_test . rotmat2euler . rough_cal_3d . save_nc . sens_struct . smooth . sound_speed . spectrum_level . speed_from_depth . spherical_cal . tag2animal . tortuosity . track3D . undo_cal . zero_crossings . 
Some associated R codes: a2pr.R . absorption.R . acc_wgs84.R . add_nc.R . apply_cal.R . applymethod1.R . applymethod2.R . block_acf.R . block_mean.R . block_rms.R . body_axes.R . buffer.R . check_AM.R . cline.R . col_line.R . col_line3.R . comp_filt.R . crop.R . crop_all.R . crop_to.R . crosshairs.R . csv2struct.R . data.R . decdc.R . decz.R . depth2pressure.R . depth_rate.R . detect_peaks.R . dive_stats.R . draw_axis.R . dsf.R . euler2rotmat.R . extract.R . extract_cues.R . find_dives.R . fir_nodelay.R . fit_tracks.R . fix_offset_3d.R . fix_pressure.R . get_clicked_pt.R . get_researcher.R . get_species.R . hilbert_env.R . hilbert_transform.R . htrack.R . image_irreg.R . inclination.R . interp2length.R . interp_nan.R . inv_axis.R . julian_day.R . keybd1.R . keybd2.R . lalo2llf.R . load_nc.R . m2h.R . m_dist.R . make_info.R . make_specgram.R . mean_absorption.R . median_filter.R . merge_fields.R . metadata_editor.R . mousedown1.R . msa.R . njerk.R . norm2.R . ocdr.R . odba.R . plot_prh_fig1.R . plot_prh_fig2.R . plot_prh_fig2_m2.R . plott.R . prh_predictor1.R . prh_predictor2.R . ptrack.R . read_cats.R . read_cats_csv.R . rotate_data.R . rotate_vecs.R . rotation_test.R . rotmat2euler.R . rough_cal_3d.R . save_nc.R . sens_struct.R . smooth.R . sound_speed.R . spectrum_level.R . speed_from_depth.R . spherical_cal.R . tag2animal.R . tortuosity.R . track3D.R . undo_cal.R . zero_crossings.R .  Full tagtools package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

crossrun  
Joint Distribution of Number of Crossings and Longest Run
Joint distribution of number of crossings and the longest run in a series of independent Bernoulli ...
Download / Learn more Package Citations See dependency  
RcppHNSW  
'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors
'Hnswlib' is a C++ library for Approximate Nearest Neighbors. This package provides a minimal R int ...
Download / Learn more Package Citations See dependency  
kgschart  
KGS Rank Graph Parser
Restore underlining numeric data from rating history graph of KGS (an online platform of the game o ...
Download / Learn more Package Citations See dependency  
SCBiclust  
Identifies Mean, Variance, and Hierarchically Clustered Biclusters
Identifies a bicluster, a submatrix of the data such that the features and observations within the s ...
Download / Learn more Package Citations See dependency  
deductive  
Data Correction and Imputation Using Deductive Methods
Attempt to repair inconsistencies and missing values in data records by using information from vali ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

23,229

R Packages

199,929

Dependencies

62,984

Author Associations

23,230

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA