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tRophicPosition  

Bayesian Trophic Position Estimation with Stable Isotopes
View on CRAN: Click here


Download and install tRophicPosition package within the R console
Install from CRAN:
install.packages("tRophicPosition")

Install from Github:
library("remotes")
install_github("cran/tRophicPosition")

Install by package version:
library("remotes")
install_version("tRophicPosition", "0.8.0")



Attach the package and use:
library("tRophicPosition")
Maintained by
Claudio Quezada-Romegialli
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-06-12
Latest Update: 2023-10-15
Description:
Estimates the trophic position of a consumer relative to a baseline species. It implements a Bayesian approach which combines an interface to the 'JAGS' MCMC library of 'rjags' and stable isotopes. Users are encouraged to test the package and send bugs and/or errors to trophicposition-support@googlegroups.com.
How to cite:
Claudio Quezada-Romegialli (2017). tRophicPosition: Bayesian Trophic Position Estimation with Stable Isotopes. R package version 0.8.0, https://cran.r-project.org/web/packages/tRophicPosition. Accessed 28 Mar. 2025.
Previous versions and publish date:
0.7.0 (2017-06-12 06:28), 0.7.3 (2017-10-12 17:07), 0.7.5 (2018-01-29 06:22), 0.7.7 (2019-04-06 08:00), 0.8.0 (2022-12-14 12:40)
Other packages that cited tRophicPosition R package
View tRophicPosition citation profile
Other R packages that tRophicPosition depends, imports, suggests or enhances
Functions, R codes and Examples using the tRophicPosition R package
Some associated functions: Bilagay . Finnish_Lakes . Orestias . Roach . TDF . TEF . TPmodel . Trout . compareTwoDistributions . credibilityIntervals . extractIsotopeData . extractPredictiveData . fromParallelTP . generateTPData . getPosteriorMode . jagsBayesianModel . jagsOneBaseline . jagsTwoBaselines . jagsTwoBaselinesFull . loadIsotopeData . multiModelTP . multiSpeciesTP . pairwiseComparisons . parametricTP . plot.isotopeData . plotMCMC . plotTP . posteriorTP . screenFoodWeb . screenIsotopeData . simulateTDF . simulateTEF . summariseIsotopeData . summary.isotopeData . trophicDensityPlot . 
Some associated R codes: Bilagay.R . Finnish_Lakes.R . Orestias.R . Roach.R . TDF.R . TEF.R . TPmodel.R . Trout.R . biPlot.R . checkNames.R . compareTwoDistributions.R . credibilityIntervals.R . extractIsotopeData.R . extractPredictiveData.R . fromParallelTP.R . generataIsotopeData.R . generataTPData.R . getPosteriorMode.R . jagsBayesianModel.R . jagsOneBaseline.R . jagsTwoBaselines.R . jagsTwoBaselinesFull.R . jagsTwoBaselinesFullc.R . jagsTwoBaselinesPost.R . loadIsotopeData.R . multiModelTP.R . multiSourceTP.R . multiSpeciesTP.R . pairwiseComparisons.R . parametricTP.R . plot.isotopeData.R . plotMCMC.R . plotTP.R . posteriorTP.R . reOrder.R . screenFoodWeb.R . screenIsotopeData.R . screenIsotopeData1source.R . screenIsotopeData3sources.R . screenIsotopeDataMoreSources.R . simulateTDF.R . simulateTEF.R . summariseIsotopeData.R . summary.isotopeData.R . theme0.R . toStacked.R . trophicDensityPlot.R . zzz.R .  Full tRophicPosition package functions and examples
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