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submitr  

Scaffold and Submit Computational Jobs to HTC Schedulers
View on CRAN: Click here


Download and install submitr package within the R console
Install from CRAN:
install.packages("submitr")

Install from Github:
library("remotes")
install_github("cran/submitr")

Install by package version:
library("remotes")
install_version("submitr", "0.1.0")



Attach the package and use:
library("submitr")
Maintained by
Erwin Lares
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-05-19
Latest Update: 2026-05-19
Description:
Provides scaffolding tools to help researchers prepare and submit computational jobs to high-throughput computing (HTC) schedulers. Generates the files required to run containerized R analyses on 'HTCondor', including submit files and executable scripts, and wraps the system commands needed to stage files, submit jobs, monitor status, and retrieve results from a CHTC submit node. Provides 'htc_config()' for managing connection details and SSH connection reuse guidance. Works naturally alongside 'containr' for container image management and 'toolero' for dataset splitting and project scaffolding.
How to cite:
Erwin Lares (2026). submitr: Scaffold and Submit Computational Jobs to HTC Schedulers. R package version 0.1.0, https://cran.r-project.org/web/packages/submitr. Accessed 24 Oct. 2026.
Previous versions and publish date:
No previous versions
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Complete documentation for submitr
Functions, R codes and Examples using the submitr R package
Full submitr package functions and examples
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