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statgenIBD
View on CRAN: Click
here
Download and install statgenIBD package within the R console
Install from CRAN:
install.packages("statgenIBD")
Install from Github:
library("remotes")
install_github("cran/statgenIBD")
Install by package version:
library("remotes")
install_version("statgenIBD", "1.0.8")
Attach the package and use:
library("statgenIBD")
Maintained by
Bart-Jan van Rossum
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.statgenIBD . https://github.com/Biometris/statgenIBD/issues . https://biometris.github.io/statgenIBD/index.html . https://github.com/Biometris/statgenIBD/ . statgenIBD results . statgenIBD.pdf . IBD calculations using statgenIBD . statgenIBD_1.0.8.tar.gz . statgenIBD_1.0.8.zip . statgenIBD_1.0.8.zip . statgenIBD_1.0.8.zip . statgenIBD_1.0.8.tgz . statgenIBD_1.0.8.tgz . statgenIBD_1.0.8.tgz . statgenIBD_1.0.8.tgz . statgenIBD_1.0.8.tgz . statgenIBD_1.0.8.tgz . statgenIBD archive . https://CRAN.R-project.org/package=statgenIBD .
First Published: 2021-08-16
Latest Update: 2023-08-30
Description:
For biparental, three and four-way crosses Identity by Descent (IBD) probabilities can be calculated using Hidden Markov Models and inheritance vectors following Lander and Green (<https://www.jstor.org/stable/29713>) and Huang (<doi:10.1073/pnas.1100465108>). One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris.
How to cite:
Bart-Jan van Rossum (2021). statgenIBD: Calculation of IBD Probabilities. R package version 1.0.8, https://cran.r-project.org/web/packages/statgenIBD. Accessed 29 Mar. 2025.
Previous versions and publish date:
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Other R packages that statgenIBD depends,
imports, suggests or enhances
Complete documentation for statgenIBD
Functions, R codes and Examples using
the statgenIBD R package
Some associated functions: allGenoPlot . c.IBDprob . calcIBD . getProbs . pedPlot . plot.IBDprob . readIBDs . readRABBIT . singleGenoPlot . statgenIBD-package . summary.IBDprob . writeFlapjack . writeIBDs .
Some associated R codes: IBDprob.R . RcppExports.R . allGenoPlot.R . getProbs.R . meanProbsPlot.R . pedPlot.R . readIBDs.R . readRABBIT.R . reexport.R . singleGenoPlot.R . statgenIBD.R . totalCoveragePlot.R . utils.R . writeFlapjack.R . writeIBDs.R . zzz.R . Full statgenIBD package functions and examples
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