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stagedtrees  

Staged Event Trees
View on CRAN: Click here


Download and install stagedtrees package within the R console
Install from CRAN:
install.packages("stagedtrees")

Install from Github:
library("remotes")
install_github("cran/stagedtrees")

Install by package version:
library("remotes")
install_version("stagedtrees", "2.3.0")



Attach the package and use:
library("stagedtrees")
Maintained by
Gherardo Varando
[Scholar Profile | Author Map]
First Published: 2019-09-27
Latest Update: 2024-02-14
Description:
Creates and fits staged event tree probability models, which are probabilistic graphical models capable of representing asymmetric conditional independence statements for categorical variables. Includes functions to create, plot and fit staged event trees from data, as well as many efficient structure learning algorithms. References: Carli F, Leonelli M, Riccomagno E, Varando G (2022). <doi:10.18637/jss.v102.i06>. Collazo R. A., Görgen C. and Smith J. Q. (2018, ISBN:9781498729604). Görgen C., Bigatti A., Riccomagno E. and Smith J. Q. (2018) <doi:10.48550/arXiv.1705.09457>. Thwaites P. A., Smith, J. Q. (2017) <doi:10.48550/arXiv.1510.00186>. Barclay L. M., Hutton J. L. and Smith J. Q. (2013) <doi:10.1016/j.ijar.2013.05.006>. Smith J. Q. and Anderson P. E. (2008) <doi:10.1016/j.artint.2007.05.004>.
How to cite:
Gherardo Varando (2019). stagedtrees: Staged Event Trees. R package version 2.3.0, https://cran.r-project.org/web/packages/stagedtrees. Accessed 29 Mar. 2025.
Previous versions and publish date:
1.0.0 (2019-09-27 11:00), 1.0.1 (2020-01-12 16:40), 1.0.2 (2020-03-30 20:20), 2.0.0 (2020-10-29 08:40), 2.0.1 (2020-12-08 11:20), 2.1.0 (2021-04-22 16:50), 2.2.0 (2021-06-21 18:00), 2.2.1 (2022-04-29 01:10)
Other packages that cited stagedtrees R package
View stagedtrees citation profile
Other R packages that stagedtrees depends, imports, suggests or enhances
Complete documentation for stagedtrees
Functions, R codes and Examples using the stagedtrees R package
Some associated functions: Asym . PhDArticles . Pokemon . as_adj_matrix . as_bn . as_parentslist . as_sevt . barplot.sevt . ceg . ceg2adjmat . check_sevt . check_sevt_prob . cid . compare_stages . confint.sevt . distance_mat_stages . edge . expand_prob . find_stage . full_indep . generate_linear_dataset . generate_random_dataset . generate_xor_dataset . get_stage . has_ctables . has_prob . inclusions_stages . is_fitted_sevt . join_stages . join_unobserved . logLik.sevt . lr_test . make_ctables . new_label . node . noisy_xor . path_probability . plot.ceg . plot.sevt . predict.sevt . print.parentslist . print.sevt . prob . probdist . rename_stage . sample_from . search_best . search_greedy . set_stage . sevt . sevt_add . sevt_df . sevt_fit . sevt_nvar . sevt_varnames . simple_clustering . split_stage_random . stagedtrees . stages . stages_bhc . stages_bhcr . stages_bj . stages_fbhc . stages_hc . stages_hclust . stages_kmeans . stndnaming . subtree . summary.sevt . text.sevt . tree_idx . uni_idx . which_class . 
Some associated R codes: 0-util-functions.R . 1-base-model-function.R . 10-comparison-functions.R . 1b-base-model-function.R . 2-plot-functions.R . 3-inference-functions.R . 4-model-selection.R . 5-classifier-model-functions.R . 6-sampling-functions.R . 7-ceg-functions.R . 8-conversion-functions.R . 9-search-order.R . data-doc.R . stagedtrees.R .  Full stagedtrees package functions and examples
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