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stacomiR  

Fish Migration Monitoring
View on CRAN: Click here


Download and install stacomiR package within the R console
Install from CRAN:
install.packages("stacomiR")

Install from Github:
library("remotes")
install_github("cran/stacomiR")

Install by package version:
library("remotes")
install_version("stacomiR", "0.6.1")



Attach the package and use:
library("stacomiR")
Maintained by
Cedric Briand
[Scholar Profile | Author Map]
First Published: 2017-06-26
Latest Update: 2024-03-03
Description:
Graphical outputs and treatment for a database of fish pass monitoring. It is a part of the 'STACOMI' open source project developed in France by the French Office for Biodiversity institute to centralize data obtained by fish pass monitoring. This version is available in French and English. See <http://stacomir.r-forge.r-project.org/> for more information on 'STACOMI'.
How to cite:
Cedric Briand (2017). stacomiR: Fish Migration Monitoring. R package version 0.6.1, https://cran.r-project.org/web/packages/stacomiR. Accessed 20 Apr. 2025.
Previous versions and publish date:
0.5.3.1 (2018-01-04 21:35), 0.5.3 (2017-06-26 18:36), 0.5.4.0 (2018-10-11 17:10), 0.5.4.1 (2019-01-27 16:40), 0.5.4.2 (2019-03-06 16:20), 0.5.4.3 (2020-03-18 16:20), 0.6.0.7 (2022-07-18 11:20), 0.6.0 (2021-11-22 09:00)
Other packages that cited stacomiR R package
View stacomiR citation profile
Other R packages that stacomiR depends, imports, suggests or enhances
Complete documentation for stacomiR
Functions, R codes and Examples using the stacomiR R package
Some associated functions: barplot-report_annual-method . calcule-report_ge_weight-method . calcule-report_mig-method . calcule-report_mig_char-method . calcule-report_mig_env-method . calcule-report_mig_interannual-method . calcule-report_mig_mult-method . calcule-report_sample_char-method . calcule-report_sea_age-method . calcule-report_silver_eel-method . calcule-report_species-method . calcule . charge-ref_choice-method . charge-ref_coe-method . charge-ref_dc-method . charge-ref_df-method . charge-ref_env-method . charge-ref_list-method . charge-ref_par-method . charge-ref_parqual-method . charge-ref_parquan-method . charge-ref_stage-method . charge-ref_taxa-method . charge-ref_textbox-method . charge-ref_year-method . charge-report_annual-method . charge-report_dc-method . charge-report_df-method . charge-report_env-method . charge-report_mig-method . charge-report_mig_char-method . charge-report_mig_env-method . charge-report_mig_interannual-method . charge-report_mig_mult-method . charge-report_ope-method . charge-report_sample_char-method . charge-report_sea_age-method . charge-report_silver_eel-method . charge-report_species-method . charge . charge_complement-ref_parqual-method . charge_complement . charge_with_filter-ref_par-method . charge_with_filter-ref_parqual-method . charge_with_filter-ref_parquan-method . charge_with_filter-ref_stage-method . charge_with_filter-ref_taxa-method . charge_with_filter . choice_c-ref_choice-method . choice_c-ref_dc-method . choice_c-ref_df-method . choice_c-ref_env-method . choice_c-ref_horodate-method . choice_c-ref_list-method . choice_c-ref_par-method . choice_c-ref_stage-method . choice_c-ref_taxa-method . choice_c-ref_textbox-method . choice_c-ref_timestep_daily-method . choice_c-ref_year-method . choice_c-report_annual-method . choice_c-report_dc-method . choice_c-report_df-method . choice_c-report_env-method . choice_c-report_ge_weight-method . choice_c-report_mig-method . choice_c-report_mig_char-method . choice_c-report_mig_env-method . choice_c-report_mig_interannual-method . choice_c-report_mig_mult-method . choice_c-report_sample_char-method . choice_c-report_sea_age-method . choice_c-report_silver_eel-method . choice_c-report_species-method . choice_c . coef_durif . colortable . connect-report_annual-method . connect-report_dc-method . connect-report_df-method . connect-report_env-method . connect-report_ge_weight-method . connect-report_mig-method . connect-report_mig_char-method . connect-report_mig_env-method . connect-report_mig_interannual-method . connect-report_mig_mult-method . connect-report_ope-method . connect-report_sample_char-method . connect-report_sea_age-method . connect-report_silver_eel-method . connect-report_species-method . end_date-ref_timestep-method . end_date . envir_stacomi . fun_aggreg_for_plot . fun_char_spe . fun_date_extraction . fun_report_mig_interannual . fun_report_mig_mult . fun_report_mig_mult_overlaps . fun_schema . fun_stage_durif . fun_table_per_dis . fun_weight_conversion . fun_write_monthly . funbarchart1DF . funbarchartDF . funboxDF . funchartDF . fungraph . fungraph_glasseel . funout . funplotreport_silver_eel . funstat . funtable . funtableDF . get_org . get_schema . get_year-ref_timestep-method . get_year . getvalue-ref_period-method . getvalue . graphdate . load_stacomi . model-report_ge_weight-method . model . plot-report_annual-missing-method . plot-report_dc-missing-method . plot-report_df-missing-method . plot-report_env-missing-method . plot-report_ge_weight-missing-method . plot-report_mig-ANY-method . plot-report_mig_char-missing-method . plot-report_mig_env-missing-method . plot-report_mig_interannual-missing-method . plot-report_mig_mult-missing-method . plot-report_sample_char-missing-method . plot-report_sea_age-missing-method . plot-report_silver_eel-missing-method . plot-report_species-missing-method . print-report_dc-method . print-report_df-method . print-report_mig-method . print-report_mig_mult-method . print-report_sample_char-method . print-report_sea_age-method . print-report_silver_eel-method . r_ann . r_ann_adour . r_dc . r_df . r_env . r_gew . r_mig . r_mig_char . r_mig_dc . r_mig_df . r_mig_env . r_mig_interannual . r_mig_interannual_vichy . r_mig_mult . r_mig_mult_dc . r_mig_mult_df . r_mig_mult_ope . r_mig_ope . r_sample_char . r_seaa . r_silver . ref_choice-class . ref_coe-class . ref_dc-class . ref_df-class . ref_env-class . ref_horodate-class . ref_list-class . ref_par-class . ref_parqual-class . ref_parquan-class . ref_period-class . ref_stage-class . ref_taxa-class . ref_textbox-class . ref_timestep-class . ref_timestepChar-class . ref_timestep_daily-class . ref_year-class . report_annual-class . report_dc-class . report_df-class . report_env-class . report_ge_weight-class . report_mig-class . report_mig_char-class . report_mig_env-class . report_mig_interannual-class . report_mig_mult-class . report_ope-class . report_sample_char-class . report_sea_age-class . report_silver_eel-class . report_species-class . setasqualitative-report_mig_char-method . setasqualitative . split_per_day . stacomi . summary-report_dc-method . summary-report_df-method . summary-report_mig-method . summary-report_mig_char-method . summary-report_mig_interannual-method . summary-report_mig_mult-method . summary-report_sample_char-method . summary-report_sea_age-method . summary-report_silver_eel-method . summary-report_species-method . supprime-ref_coe-method . supprime-report_mig_interannual-method . supprime-report_sea_age-method . supprime . validity_ref_horodate . validity_year . vector_to_listsql . write_database-report_ge_weight-method . write_database-report_mig-method . write_database-report_sea_age-method . write_database . xtable-report_annual-method . xtable-report_mig_char-method . 
Some associated R codes: create_generic.R . data.R . fun_table_per_dis.R . fun_write_monthly.R . fungraph.R . fungraph_glasseel.R . funschema.R . funstat.R . funtable.R . ref_choice.R . ref_coe.R . ref_dc.R . ref_df.R . ref_env.R . ref_horodate.R . ref_list.R . ref_par.R . ref_parqual.R . ref_parquan.R . ref_period.R . ref_stage.R . ref_taxa.R . ref_textbox.R . ref_timestep.R . ref_timestep_daily.R . ref_year.R . report_annual.R . report_dc.R . report_df.R . report_env.R . report_ge_weight.R . report_mig.R . report_mig_char.R . report_mig_env.R . report_mig_interannual.R . report_mig_mult.R . report_ope.R . report_sample_char.R . report_sea_age.R . report_silver_eel.R . report_species.R . setAs.R . stacomi.R . stacomiR-package.R . utilities.R .  Full stacomiR package functions and examples
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