Other packages > Find by keyword >

stIHC  

Spatial Transcriptomics Iterative Hierarchical Clustering
View on CRAN: Click here


Download and install stIHC package within the R console
Install from CRAN:
install.packages("stIHC")

Install from Github:
library("remotes")
install_github("cran/stIHC")

Install by package version:
library("remotes")
install_version("stIHC", "0.1.0")



Attach the package and use:
library("stIHC")
Maintained by
Catherine Higgins
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-01-12
Latest Update: 2026-01-12
Description:
Spatial transcriptomics iterative hierarchical clustering ('stIHC'), is a method for identifying spatial gene co-expression modules, defined as groups of genes with shared spatial expression patterns. The method is applicable across spatial transcriptomics technologies with differing spatial resolution, and provides a framework for investigating the spatial organisation of gene expression in tissues. For further details, see Higgins C., Li J.J., Carey M. <doi:10.1002/qub2.70011>.
How to cite:
Catherine Higgins (2026). stIHC: Spatial Transcriptomics Iterative Hierarchical Clustering. R package version 0.1.0, https://cran.r-project.org/web/packages/stIHC. Accessed 26 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited stIHC R package
View stIHC citation profile
Other R packages that stIHC depends, imports, suggests or enhances
Complete documentation for stIHC
Functions, R codes and Examples using the stIHC R package
Full stIHC package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

infotheo  
Information-Theoretic Measures
Implements various measures of information theory based on several entropy estimators. ...
Download / Learn more Package Citations See dependency  
poptrend  
Estimate Smooth and Linear Trends from Population Count Survey Data
Functions to estimate and plot smooth or linear population trends, or population indices, from anim ...
Download / Learn more Package Citations See dependency  
tactile  
New and Extended Plots, Methods, and Panel Functions for 'lattice'
Extensions to 'lattice', providing new high-level functions, methods for existing functions, panel f ...
Download / Learn more Package Citations See dependency  
ggblanket  
Simplify 'ggplot2' Visualisation
Simplify 'ggplot2' visualisation with 'ggblanket' wrapper functions. ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
colormap  
Color Palettes using Colormaps Node Module
Allows to generate colors from palettes defined in the colormap module of 'Node.js'. (see ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA