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splikit  

Analysing RNA Splicing in Single-Cell RNA Sequencing Data
View on CRAN: Click here


Download and install splikit package within the R console
Install from CRAN:
install.packages("splikit")

Install from Github:
library("remotes")
install_github("cran/splikit")

Install by package version:
library("remotes")
install_version("splikit", "2.3.1")



Attach the package and use:
library("splikit")
Maintained by
Arsham Mikaeili Namini
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-05-13
Latest Update: 2026-05-13
Description:
Provides analysis of high-dimensional single-cell splicing data. Offers a framework to extract and work with ratio-based data structures derived from single-cell RNA sequencing experiments. Provides both a modern 'R6' object-oriented interface and direct matrix manipulation functions. Core functionalities are implemented in 'C++' via 'Rcpp' to ensure high performance and scalability on large datasets.
How to cite:
Arsham Mikaeili Namini (2026). splikit: Analysing RNA Splicing in Single-Cell RNA Sequencing Data. R package version 2.3.1, https://cran.r-project.org/web/packages/splikit. Accessed 08 Jun. 2026.
Previous versions and publish date:
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Complete documentation for splikit
Functions, R codes and Examples using the splikit R package
Full splikit package functions and examples
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