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speedytax  

Rapidly Import Classifier Results into 'phyloseq'
View on CRAN: Click here


Download and install speedytax package within the R console
Install from CRAN:
install.packages("speedytax")

Install from Github:
library("remotes")
install_github("cran/speedytax")

Install by package version:
library("remotes")
install_version("speedytax", "1.0.4")



Attach the package and use:
library("speedytax")
Maintained by
John Quensen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-01-18
Latest Update: 2024-05-14
Description:
Import classification results from the 'RDP Classifier' (Ribosomal Database Project),' 'USEARCH sintax,' 'vsearch sintax' and the 'QIIME2' (Quantitative Insights into Microbial Ecology) classifiers into 'phyloseq' tax_table objects.
How to cite:
John Quensen (2024). speedytax: Rapidly Import Classifier Results into 'phyloseq'. R package version 1.0.4, https://cran.r-project.org/web/packages/speedytax. Accessed 18 Jul. 2026.
Previous versions and publish date:
(2026-07-09 07:08), 1.0.3 (2024-01-18 22:00)
Other packages that cited speedytax R package
View speedytax citation profile
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Complete documentation for speedytax
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