Other packages > Find by keyword >

snpAIMeR  

Assess the Diagnostic Power of Genomic Marker Combinations
View on CRAN: Click here


Download and install snpAIMeR package within the R console
Install from CRAN:
install.packages("snpAIMeR")

Install from Github:
library("remotes")
install_github("cran/snpAIMeR")

Install by package version:
library("remotes")
install_version("snpAIMeR", "2.1.1")



Attach the package and use:
library("snpAIMeR")
Maintained by
Kim Vertacnik
[Scholar Profile | Author Map]
First Published: 2023-12-17
Latest Update: 2024-02-20
Description:
Population genetics package for designing diagnostic panels. Candidate markers, marker combinations, and different panel sizes are assessed for how well they can predict the source population of known samples. Requires a genotype file of candidate markers in STRUCTURE format. Methods for population cross-validation are described in Jombart (2008) <doi:10.1093/bioinformatics/btn129>.
How to cite:
Kim Vertacnik (2023). snpAIMeR: Assess the Diagnostic Power of Genomic Marker Combinations. R package version 2.1.1, https://cran.r-project.org/web/packages/snpAIMeR. Accessed 23 Apr. 2025.
Previous versions and publish date:
2.1.0 (2023-12-17 09:00)
Other packages that cited snpAIMeR R package
View snpAIMeR citation profile
Other R packages that snpAIMeR depends, imports, suggests or enhances
Complete documentation for snpAIMeR
Functions, R codes and Examples using the snpAIMeR R package
Some associated functions: snpAIMeR . 
Some associated R codes: snpAIMeR-package.R . snpAIMeR_v2.1.0.R .  Full snpAIMeR package functions and examples
Downloads during the last 30 days
03/2403/2503/2603/2703/2803/2903/3003/3104/0104/0204/0304/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/21Downloads for snpAIMeR1234567891011121314TrendBars

Today's Hot Picks in Authors and Packages

ODEnetwork  
Network of Differential Equations
Simulates a network of ordinary differential equations of order two. The package provides an easy i ...
Download / Learn more Package Citations See dependency  
miCoPTCM  
Promotion Time Cure Model with Mis-Measured Covariates
Fits Semiparametric Promotion Time Cure Models, taking into account (using a corrected score approa ...
Download / Learn more Package Citations See dependency  
BLRShiny2  
Interactive Document for Working with Binary Logistic Regression Analysis
An interactive document on the topic of binary logistic regression analysis using 'rmarkdown' and ...
Download / Learn more Package Citations See dependency  
GenomeAdapt  
Detecting Signatures of Local Adaptation Based on Ancestry Trajectories
Portable, scalable and highly computationally efficient tool for detecting signatures of local adapt ...
Download / Learn more Package Citations See dependency  
sociome  
Operationalizing Social Determinants of Health Data for Researchers
Accesses raw data via API and calculates social determinants of health measures for user-specified l ...
Download / Learn more Package Citations See dependency  
pkgndep  
Analyze Dependency Heaviness of R Packages
A new metric named 'dependency heaviness' is proposed that measures the number of additional depend ...
Download / Learn more Package Citations See dependency  

24,098

R Packages

207,311

Dependencies

65,069

Author Associations

24,099

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA