Other packages > Find by keyword >

simulMGF  

Simulate SNP Matrix, Phenotype and Genotypic Effects
View on CRAN: Click here


Download and install simulMGF package within the R console
Install from CRAN:
install.packages("simulMGF")

Install from Github:
library("remotes")
install_github("cran/simulMGF")

Install by package version:
library("remotes")
install_version("simulMGF", "0.1.1")



Attach the package and use:
library("simulMGF")
Maintained by
Martin Nahuel Garcia
[Scholar Profile | Author Map]
First Published: 2023-03-26
Latest Update: 2023-04-02
Description:
Simulate genotypes in SNP (single nucleotide polymorphisms) Matrix as random numbers from an uniform distribution, for diploid organisms (coded by 0, 1, 2), Sikorska et al., (2013) <doi:10.1186/1471-2105-14-166>, or half-sib/full-sib SNP matrix from real or simulated parents SNP data, assuming mendelian segregation. Simulate phenotypic traits for real or simulated SNP data, controlled by a specific number of quantitative trait lociand their effects, sampled from a Normal or an Uniform distributions, assuming a pure additive model. This is useful for testing association and genomic prediction models or for educational purposes.
How to cite:
Martin Nahuel Garcia (2023). simulMGF: Simulate SNP Matrix, Phenotype and Genotypic Effects. R package version 0.1.1, https://cran.r-project.org/web/packages/simulMGF. Accessed 29 Mar. 2025.
Previous versions and publish date:
0.1.0 (2023-03-26 21:20)
Other packages that cited simulMGF R package
View simulMGF citation profile
Other R packages that simulMGF depends, imports, suggests or enhances
Complete documentation for simulMGF
Functions, R codes and Examples using the simulMGF R package
Some associated functions: simGeno . simPheno . simulFS . simulHS . simulN . simulU . 
Some associated R codes: script_simulMGF.R .  Full simulMGF package functions and examples
Downloads during the last 30 days
02/2702/2803/0103/0203/0303/0403/0503/0603/0703/0803/0903/1003/1103/1203/1303/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/27Downloads for simulMGF051015202530354045TrendBars

Today's Hot Picks in Authors and Packages

landmix  
Landmark Prediction for Mixture Data
Non-parametric prediction of survival outcomes for mixture data that incorporates covariates and a l ...
Download / Learn more Package Citations See dependency  
gglgbtq  
Show Pride on 'ggplot2' Plots
Provides multiple palettes based on pride flags with tailored themes. ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

23,842

R Packages

207,311

Dependencies

64,420

Author Associations

23,781

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA