Other packages > Find by keyword >

simulMGF  

Simulate SNP Matrix, Phenotype and Genotypic Effects
View on CRAN: Click here


Download and install simulMGF package within the R console
Install from CRAN:
install.packages("simulMGF")

Install from Github:
library("remotes")
install_github("cran/simulMGF")

Install by package version:
library("remotes")
install_version("simulMGF", "0.1.1")



Attach the package and use:
library("simulMGF")
Maintained by
Martin Nahuel Garcia
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-03-26
Latest Update: 2023-04-02
Description:
Simulate genotypes in SNP (single nucleotide polymorphisms) Matrix as random numbers from an uniform distribution, for diploid organisms (coded by 0, 1, 2), Sikorska et al., (2013) <doi:10.1186/1471-2105-14-166>, or half-sib/full-sib SNP matrix from real or simulated parents SNP data, assuming mendelian segregation. Simulate phenotypic traits for real or simulated SNP data, controlled by a specific number of quantitative trait lociand their effects, sampled from a Normal or an Uniform distributions, assuming a pure additive model. This is useful for testing association and genomic prediction models or for educational purposes.
How to cite:
Martin Nahuel Garcia (2023). simulMGF: Simulate SNP Matrix, Phenotype and Genotypic Effects. R package version 0.1.1, https://cran.r-project.org/web/packages/simulMGF. Accessed 05 Mar. 2026.
Previous versions and publish date:
0.1.0 (2023-03-26 21:20)
Other packages that cited simulMGF R package
View simulMGF citation profile
Other R packages that simulMGF depends, imports, suggests or enhances
Complete documentation for simulMGF
Functions, R codes and Examples using the simulMGF R package
Some associated functions: simGeno . simPheno . simulFS . simulHS . simulN . simulU . 
Some associated R codes: script_simulMGF.R .  Full simulMGF package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
ClimClass  
Climate Classification According to Several Indices
Classification of climate according to Koeppen - Geiger, of aridity indices, of continentality indi ...
Download / Learn more Package Citations See dependency  
neat  
Efficient Network Enrichment Analysis Test
Includes functions and examples to compute NEAT, the Network Enrichment Analysis Test described in ...
Download / Learn more Package Citations See dependency  
diffIRT  
Diffusion IRT Models for Response and Response Time Data
Package to fit diffusion-based IRT models to response and response time data. Models are fit using ...
Download / Learn more Package Citations See dependency  
roccv  
ROC for Cross Validation Results
Cross validate large genetic data while specifying clinical variables that should always be in the m ...
Download / Learn more Package Citations See dependency  
imagefx  
Extract Features from Images
Synthesize images into characteristic features for time-series analysis or machine learning applicat ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,244

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA