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simcross
View on CRAN: Click
here
Download and install simcross package within the R console
Install from CRAN:
install.packages("simcross")
Install from Github:
library("remotes")
install_github("cran/simcross")
Install by package version:
library("remotes")
install_version("simcross", "0.6")
Attach the package and use:
library("simcross")
Maintained by
Karl W Broman
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-09-24
Latest Update: 2023-11-29
Description:
Simulate and plot general experimental crosses. The focus is on simulating genotypes with an aim towards flexibility rather than speed. Meiosis is simulated following the Stahl model, in which chiasma locations are the superposition of two processes: a proportion p coming from a process exhibiting no interference, and the remainder coming from a process following the chi-square model.
How to cite:
Karl W Broman (2020). simcross: Simulate Experimental Crosses. R package version 0.6, https://cran.r-project.org/web/packages/simcross. Accessed 04 Jan. 2025.
Previous versions and publish date:
0.3-6 (2020-09-24 10:50)
Other packages that cited simcross R package
View simcross citation profile
Other R packages that simcross depends,
imports, suggests or enhances
Complete documentation for simcross
Functions, R codes and Examples using
the simcross R package
Some associated functions: AILped . CCcolors . calc_Lstar . check_pedigree . collapse_do_alleles . convert2geno . convert2geno_allchr . create_parent . cross . get_geno . mouseL_cox . mouseL_mgi . plot_crosslines . plot_ind . sim_4way_pedigree . sim_ail_pedigree . sim_ail_pedigree_fix_n . sim_crossovers . sim_do_pedigree . sim_do_pedigree_fix_n . sim_dof1_pedigree . sim_from_pedigree . sim_from_pedigree_allchr . sim_meiosis . sim_ril_pedigree . where_het .
Some associated R codes: AILped-data.R . RcppExports.R . check_pedigree.R . collapse_do_alleles.R . convert2geno.R . convert2geno_allchr.R . get_geno.R . mouseL_cox-data.R . mouseL_mgi-data.R . plot_cross.R . sim_4way_pedigree.R . sim_ail_pedigree.R . sim_ail_pedigree_fix_n.R . sim_do_pedigree.R . sim_do_pedigree_fix_n.R . sim_dof1_pedigree.R . sim_from_pedigree.R . sim_from_pedigree_allchr.R . sim_meiosis.R . sim_ril.R . sim_ril_pedigree.R . where_het.R . zzz.R . Full simcross package functions and examples
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