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simIDM
View on CRAN: Click
here
Download and install simIDM package within the R console
Install from CRAN:
install.packages("simIDM")
Install from Github:
library("remotes")
install_github("cran/simIDM")
Install by package version:
library("remotes")
install_version("simIDM", "0.1.0")
Attach the package and use:
library("simIDM")
Maintained by
Alexandra Erdmann
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-01-27
Latest Update: 2023-12-11
Description:
Based on the illness-death model a large number of clinical trials with oncology endpoints progression-free survival (PFS) and overall survival (OS) can be simulated, see Meller, Beyersmann and Rufibach (2019) <doi:10.1002/sim.8295>.The simulation set-up allows for random and event-driven censoring, an arbitrary number of treatment arms, staggered study entry and drop-out.Exponentially, Weibull and piecewise exponentially distributed survival times can be generated. The correlation between PFS and OS can be calculated.
How to cite:
Alexandra Erdmann (2023). simIDM: Simulating Oncology Trials using an Illness-Death Model. R package version 0.1.0, https://cran.r-project.org/web/packages/simIDM
Previous versions and publish date:
0.0.5 (2023-01-27 17:40)
Other packages that cited simIDM R package
View simIDM citation profile
Other R packages that simIDM depends,
imports, suggests or enhances
Functions, R codes and Examples using
the simIDM R package
Some associated functions: ExpHazOS . ExpQuantOS . ExpSurvOS . ExpSurvPFS . PCWInversionMethod . PFSOSInteg . PWCsurvOS . PWCsurvPFS . PwcOSInt . WeibOSInteg . WeibSurvOS . WeibSurvPFS . addStaggeredEntry . assert_intervals . assert_positive_number . avgHRExpOS . avgHRIntegExpOS . censoringByNumberEvents . corPFSOS . corTrans . empSignificant . estimateParams . exponential_transition . expvalOSInteg . expvalPFSInteg . getCensoredData . getClinicalTrials . getDatasetWideFormat . getEventsAll . getInit . getNumberEvents . getOneClinicalTrial . getOneToTwoRows . getPCWDistr . getPWCHazard . getResults . getSimulatedData . getSumPCW . getTarget . getTimePoint . getWaitTimeSum . haz . integrateVector . logRankTest . log_p11 . negLogLik . p11Integ . passedLogRank . piecewise_exponential . prepareData . pwA . runTrial . simIDM-package . singleExpQuantOS . survOS . survPFS . survPFSOS . survTrans . trackEventsPerTrial . weibull_transition .
Some associated R codes: assertions.R . corPFSOS.R . empSignificant.R . estimateParams.R . eventTracking.R . getClinicalTrials.R . getSimulatedData.R . getWaitTimeSum.R . hazardFunctions.R . package.R . piecewiseDistribution.R . piecewiseHazards.R . survivalFunctions.R . transitionParameters.R . Full simIDM package functions and examples
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