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signatureSurvival
View on CRAN: Click
here
Download and install signatureSurvival package within the R console
Install from CRAN:
install.packages("signatureSurvival")
Install from Github:
library("remotes")
install_github("cran/signatureSurvival")
Install by package version:
library("remotes")
install_version("signatureSurvival", "1.0.0")
Attach the package and use:
library("signatureSurvival")
Maintained by
Yuan-De Tan
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-07-19
Latest Update: 2023-07-19
Description:
When multiple Cox proportional hazard models are performed on clinical data (month or year and status) and a set of differential expressions of genes, the results (Hazard risks, z-scores and p-values) can be used to create gene-expression signatures. Weights are calculated using the survival p-values of genes and are utilized to calculate expression values of the signature across the selected genes in all patients in a cohort. A Single or multiple univariate or multivariate Cox proportional hazard survival analyses of the patients in one cohort can be performed by using the gene-expression signature and visualized using our survival plots.
How to cite:
Yuan-De Tan (2023). signatureSurvival: Signature Survival Analysis. R package version 1.0.0, https://cran.r-project.org/web/packages/signatureSurvival. Accessed 21 Nov. 2024.
Previous versions and publish date:
No previous versions
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Other R packages that signatureSurvival depends,
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Complete documentation for signatureSurvival
Functions, R codes and Examples using
the signatureSurvival R package
Some associated functions: GSE50081 . MKMplot . MMKMplot . MUKMplot . MVKMresult . SKMCresult . TCGA_forestplt . TCGA_survivalData . TS_signature . UKMplot . musvtest . mvstest . results . signatureExp . signatureSurvival-package . signature_weight . survivalForest . weight .
Some associated R codes: MKMplot.R . MMKMplot.R . MUKMplot.R . MVKMresult.R . SKMCresult.R . UKMplot.R . musvtest.R . mvstest.R . signatureExp.R . survivalForest.R . weight.R . Full signatureSurvival package functions and examples
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