R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
shinyWGD
'Shiny' Application for Whole Genome Duplication Analysis
View on CRAN: Click
here
Download and install shinyWGD package within the R console
Install from CRAN:
install.packages("shinyWGD")
Install from Github:
library("remotes")
install_github("cran/shinyWGD") Install by package version:
library("remotes")
install_version("shinyWGD", "1.0.0") Attach the package and use:
library("shinyWGD")
Maintained by
Jia Li
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-11-13
Latest Update: 2024-11-13
Description:
Provides a comprehensive 'Shiny' application for analyzing Whole Genome Duplication ('WGD') events. This package provides a user-friendly 'Shiny' web application for non-experienced researchers to prepare input data and execute command lines for several well-known 'WGD' analysis tools, including 'wgd', 'ksrates', 'i-ADHoRe', 'OrthoFinder', and 'Whale'. This package also provides the source code for experienced researchers to adjust and install the package to their own server. Key Features 1) Input Data Preparation This package allows users to conveniently upload and format their data, making it compatible with various 'WGD' analysis tools. 2) Command Line Generation This package automatically generates the necessary command lines for selected 'WGD' analysis tools, reducing manual errors and saving time. 3) Visualization This package offers interactive visualizations to explore and interpret 'WGD' results, facilitating in-depth 'WGD' analysis. 4) Comparative Genomics Users can study and compare 'WGD' events across different species, aiding in evolutionary and comparative genomics studies. 5) User-Friendly Interface This 'Shiny' web application provides an intuitive and accessible interface, making 'WGD' analysis accessible to researchers and 'bioinformaticians' of all levels.
How to cite:
Jia Li (2024). shinyWGD: 'Shiny' Application for Whole Genome Duplication Analysis. R package version 1.0.0, https://cran.r-project.org/web/packages/shinyWGD. Accessed 24 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited shinyWGD R package
View shinyWGD citation profile
Other R packages that shinyWGD depends,
imports, suggests or enhances
Complete documentation for shinyWGD
Functions, R codes and Examples using
the shinyWGD R package
Full shinyWGD package
functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
FDRsampsize
Compute Sample Size that Meets Requirements for Average Power and FDR
Defines a collection of functions to compute average power and sample size for studies that use the ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Stan Pounds (view profile)
magicfor
Magic Functions to Obtain Results from for Loops
Magic functions to obtain results from for loops. ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Koji Makiyama (view profile)
climwin
Climate Window Analysis
Contains functions to detect and visualise periods of climate
sensitivity (climate windows) for a g ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Liam D. Bailey (view profile)
quickcode
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
forecastHybrid
Convenient Functions for Ensemble Time Series Forecasts
Convenient functions for ensemble forecasts in R combining
approaches from the 'forecast' package. ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: David Shaub (view profile)
gemlog
File Conversion for "Gem Infrasound Logger"
Reads data files from the 'Gem infrasound logger' for analysis and converts to segy format (which is ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Jake Anderson (view profile)
29,080
R Packages
247,686
Dependencies
77,281
Author Associations
29,081
Publication Badges
