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segregatr  

Segregation Analysis for Variant Interpretation
View on CRAN: Click here


Download and install segregatr package within the R console
Install from CRAN:
install.packages("segregatr")

Install from Github:
library("remotes")
install_github("cran/segregatr")

Install by package version:
library("remotes")
install_version("segregatr", "0.4.0")



Attach the package and use:
library("segregatr")
Maintained by
Magnus Dehli Vigeland
[Scholar Profile | Author Map]
First Published: 2021-04-15
Latest Update: 2023-06-26
Description:
An implementation of the full-likelihood Bayes factor (FLB) for evaluating segregation evidence in clinical medical genetics. The method was introduced by Thompson et al. (2003) , and further popularised by Bayrak-Toydemir et al. (2008) . This implementation allows custom penetrance values and liability classes, and includes specialised pedigree visualisations.
How to cite:
Magnus Dehli Vigeland (2021). segregatr: Segregation Analysis for Variant Interpretation. R package version 0.4.0, https://cran.r-project.org/web/packages/segregatr. Accessed 13 Apr. 2025.
Previous versions and publish date:
0.2.0 (2021-04-15 09:40), 0.3.0 (2023-06-26 22:10)
Other packages that cited segregatr R package
View segregatr citation profile
Other R packages that segregatr depends, imports, suggests or enhances
Complete documentation for segregatr
Functions, R codes and Examples using the segregatr R package
Some associated functions: FLB . plotSegregation . segregatr . 
Some associated R codes: FLB.R . penetrances.R . plotSegregation.R . segregatr-package.R . startdata_causative.R . startdata_causative_X.R . utils.R .  Full segregatr package functions and examples
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