Other packages > Find by keyword >

segmenTier  

Similarity-Based Segmentation of Multidimensional Signals
View on CRAN: Click here


Download and install segmenTier package within the R console
Install from CRAN:
install.packages("segmenTier")

Install from Github:
library("remotes")
install_github("cran/segmenTier")

Install by package version:
library("remotes")
install_version("segmenTier", "0.1.2")



Attach the package and use:
library("segmenTier")
Maintained by
Rainer Machne
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-02-18
Latest Update: 2019-02-18
Description:
A dynamic programming solution to segmentation based on maximization of arbitrary similarity measures within segments. The general idea, theory and this implementation are described in Machne, Murray & Stadler (2017) . In addition to the core algorithm, the package provides time-series processing and clustering functions as described in the publication. These are generally applicable where a `k-means` clustering yields meaningful results, and have been specifically developed for clustering of the Discrete Fourier Transform of periodic gene expression data (`circadian' or `yeast metabolic oscillations'). This clustering approach is outlined in the supplemental material of Machne & Murray (2012) ), and here is used as a basis of segment similarity measures. Notably, the time-series processing and clustering functions can also be used as stand-alone tools, independent of segmentation, e.g., for transcriptome data already mapped to genes.
How to cite:
Rainer Machne (2019). segmenTier: Similarity-Based Segmentation of Multidimensional Signals. R package version 0.1.2, https://cran.r-project.org/web/packages/segmenTier. Accessed 25 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited segmenTier R package
View segmenTier citation profile
Other R packages that segmenTier depends, imports, suggests or enhances
Complete documentation for segmenTier
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

foster  
Forest Structure Extrapolation with R
Set of tools to streamline the modeling of the relationship betweensatellite imagery time series or ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
airGRiwrm  
'airGR' Integrated Water Resource Management
Semi-distributed Precipitation-Runoff Modelling based on 'airGR' package models integrating human i ...
Download / Learn more Package Citations See dependency  
sitmo  
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel enviro ...
Download / Learn more Package Citations See dependency  
edeaR  
Exploratory and Descriptive Event-Based Data Analysis
Exploratory and descriptive analysis of event based data. Provides methods for describing and select ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA