Other packages > Find by keyword >

sccore  

Core Utilities for Single-Cell RNA-Seq
View on CRAN: Click here


Download and install sccore package within the R console
Install from CRAN:
install.packages("sccore")

Install from Github:
library("remotes")
install_github("cran/sccore")

Install by package version:
library("remotes")
install_version("sccore", "1.0.6")



Attach the package and use:
library("sccore")
Maintained by
Evan Biederstedt
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-09-30
Latest Update: 2025-04-13
Description:
Core utilities for single-cell RNA-seq data analysis. Contained within are utility functions for working with differential expression (DE) matrices and count matrices, a collection of functions for manipulating and plotting data via 'ggplot2', and functions to work with cell graphs and cell embeddings. Graph-based methods include embedding kNN cell graphs into a UMAP , collapsing vertices of each cluster in the graph, and propagating graph labels.
How to cite:
Evan Biederstedt (2020). sccore: Core Utilities for Single-Cell RNA-Seq. R package version 1.0.6, https://cran.r-project.org/web/packages/sccore. Accessed 26 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:01), 0.1.0 (2020-09-30 12:00), 0.1.1 (2020-12-14 10:20), 0.1.2 (2021-02-23 13:20), 0.1.3 (2021-05-05 08:00), 1.0.0 (2021-10-07 22:00), 1.0.1 (2021-12-12 06:40), 1.0.2 (2022-08-23 21:50), 1.0.3 (2023-03-13 01:00), 1.0.4 (2023-07-13 01:50), 1.0.5 (2024-02-23 01:00), 1.0.6 (2025-04-13 21:20)
Other packages that cited sccore R package
View sccore citation profile
Other R packages that sccore depends, imports, suggests or enhances
Complete documentation for sccore
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

PCADSC  
Tools for Principal Component Analysis-Based Data Structure Comparisons
A suite of non-parametric, visual tools for assessing differences in data structures for two datase ...
Download / Learn more Package Citations See dependency  
leafgl  
High-Performance 'WebGl' Rendering for Package 'leaflet'
Provides bindings to the 'Leaflet.glify' JavaScript library which extends the 'leaflet' JavaScript l ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
SelvarMix  
Regularization for Variable Selection in Model-Based Clustering and Discriminant Analysis
Performs a regularization approach to variable selection in themodel-based clustering and classifica ...
Download / Learn more Package Citations See dependency  
RCytoGPS  
Using Cytogenetics Data in R
Defines classes and methods to process text-based cytogenetics using the CytoGPS web site, then imp ...
Download / Learn more Package Citations See dependency  
ncodeR  
Techniques for Automated Classifiers
A set of techniques that can be used to develop, validate, and implement automated classifiers. A po ...
Download / Learn more Package Citations See dependency  

28,332

R Packages

239,283

Dependencies

75,113

Author Associations

28,333

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA