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sccca  

Single-Cell Correlation Based Cell Type Annotation
View on CRAN: Click here


Download and install sccca package within the R console
Install from CRAN:
install.packages("sccca")

Install from Github:
library("remotes")
install_github("cran/sccca")

Install by package version:
library("remotes")
install_version("sccca", "0.1.1")



Attach the package and use:
library("sccca")
Maintained by
Mohamed Soudy
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-03-01
Latest Update: 2024-03-13
Description:
Performing cell type annotation based on cell markers from a unified database. The approach utilizes correlation-based approach combined with association analysis using Fisher-exact and phyper statistical tests (Upton, Graham JG. (1992) ).
How to cite:
Mohamed Soudy (2024). sccca: Single-Cell Correlation Based Cell Type Annotation. R package version 0.1.1, https://cran.r-project.org/web/packages/sccca. Accessed 04 Jul. 2026.
Previous versions and publish date:
0.1.0 (2024-03-01 15:00)
Other packages that cited sccca R package
View sccca citation profile
Other R packages that sccca depends, imports, suggests or enhances
Complete documentation for sccca
Functions, R codes and Examples using the sccca R package
Full sccca package functions and examples
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