R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
scaper
View on CRAN: Click
here
Download and install scaper package within the R console
Install from CRAN:
install.packages("scaper")
Install from Github:
library("remotes")
install_github("cran/scaper") Install by package version:
library("remotes")
install_version("scaper", "0.2.0") Attach the package and use:
library("scaper")
Maintained by
Azka Javaid
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-10-19
Latest Update: 2025-04-16
Description:
Generates cell-level cytokine activity estimates using relevant information from gene sets constructed with the 'CytoSig' and the 'Reactome' databases and scored using the modified 'Variance-adjusted Mahalanobis (VAM)' framework for single-cell RNA-sequencing (scRNA-seq) data. 'CytoSig' database is described in: Jiang at al., (2021) . 'Reactome' database is described in: Gillespie et al., (2021) . The 'VAM' method is outlined in: Frost (2020) .
How to cite:
Azka Javaid (2023). scaper: Single Cell Transcriptomics-Level Cytokine Activity Prediction and Estimation. R package version 0.2.0, https://cran.r-project.org/web/packages/scaper. Accessed 09 Mar. 2026.
Previous versions and publish date:
0.1.0 (2023-10-19 09:20)
Other packages that cited scaper R package
View scaper citation profile
Other R packages that scaper depends,
imports, suggests or enhances
Complete documentation for scaper
Functions, R codes and Examples using
the scaper R package
Some associated functions: genesetCytoSig . genesetReactome . pipe . scape . scapeForSeurat . scaper-package . supportedCytokines .
Some associated R codes: genesetCytoSig.R . genesetReactome.R . globals.R . scape.R . scapeForSeurat.R . scaper-package.R . supportedCytokines.R . utils-pipe.R . Full scaper package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
rzentra
Provides functionality to read settings, statuses and readings of
weather stations from the 'ZENTRA ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Eduard Szöcs (view profile)
ggblanket
Simplify 'ggplot2' visualisation with 'ggblanket' wrapper
functions. ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: David Hodge (view profile)
pooling
Functions for calculating power and fitting regression models in studies where a biomarker is measur ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Dane R. Van Domelen (view profile)
Rgb
Classes and methods to efficiently handle (slice, annotate, draw ...) genomic features (such as gene ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Sylvain Mareschal (view profile)
nextGenShinyApps
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
26,293
R Packages
225,784
Dependencies
70,376
Author Associations
26,294
Publication Badges
